Succession of the bacterial community structure and functional prediction in two composting systems viewed through metatranscriptomics
文献类型： 外文期刊
作者： Ding, Jianli 1 ; Wei, Dan 1 ; An, Zhizhuang 1 ; Zhang, Chengjun 1 ; Jin, Liang 1 ; Wang, Lei 1 ; Li, Yan 1 ; Li, Qiao 1 ;
作者机构： 1.Beijing Acad Agr & Forestry Sci, Inst Plant Nutr & Resources, Beijing 100097, Peoples R China
关键词： Bioreactor composting; Microbial community structures; Metabolic function; Metatranscriptomics; Relative abundances
期刊名称：BIORESOURCE TECHNOLOGY （ 影响因子：9.642； 五年影响因子：9.237 ）
ISSN： 0960-8524
年卷期： 2020 年 313 卷
页码：
收录情况： SCI
摘要： In this work, Illumina MiSeq sequencing of cDNA from metatranscriptomics RNA reverse transcription were employed in combination with phylogenetic investigation of communities by reconstruction of unobserved states (PICRUSt) to estimate the dynamic variations of bacterial community structures and metabolic functions in a bioreactor and traditional composting process. Results showed that the change of bacterial alpha-diversity in the first three stages exhibit opposite trends in the two composting systems. The four most abundant phyla were the same in both systems (Firmicutes, Proteobacteria, Bacteroidetes and Actinobacteria), but the most abundant genera were different. The five most abundant genus-level groups in the bioreactor were Psychrobacter, Galbibacter, Pseudomonas, Staphylococcus and Flavobacterium. Within the same phase, the functional bacteria were dramatically different in the two composting processes. In the bioreactor system both bacterial community structure and metabolism function were greatly affected by available phosphorus.
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