Characterization and phylogenetic analysis of the complete mitochondrial genome of a tropical sea cucumber,Holothuria fuscocinerea
文献类型： 外文期刊
作者： Cheng, Chuhang 1 ; Wu, Feifei 1 ; Ren, Chunhua 1 ; Jiang, Xiao 1 ; Wu, Xiaofen 1 ; Huang, Wen 1 ; Hu, Chaoqun 1 ;
作者机构： 1.Chinese Acad Sci, Guangdong Prov Key Lab Appl Marine Biol LAMB, South China Sea Inst Oceanol, CAS Key Lab Trop Marine Bioresources & Ecol LMB, 164 West Xingang Rd, Guangzhou 510301, Peoples R China
2.Univ Chinese Acad Sci, Beijing, Peoples R China
3.Guangdong Acad Agr Sci, Inst Anim Sci, Guangdong Key Lab Anim Breeding & Nutr,Minist Agr, Lab Aquat Sci Key Lab Anim Nutr & Feed Sci South, Guangzhou, Peoples R China
4.Chinese Acad Sci, Inst South China Sea Ecol & Environm Engn ISEE, Guangzhou, Peoples R China
关键词： Mitochondrial genome; Holothuria fuscocinerea; Phylogenetic analysis; 16S rRNA
期刊名称：MITOCHONDRIAL DNA PART B-RESOURCES （ 影响因子：0.658； 五年影响因子：0.674 ）
ISSN：
年卷期： 2020 年 5 卷 3 期
页码：
收录情况： SCI
摘要： In this study, the mitochondrial genome (mitogenome) ofHolothuria fuscocinereawas unraveled to be 15,890 bp in length, containing 13 protein-coding genes (PCGs), 22 tRNA genes, and 2 rRNA genes. The PCGs were initiated by four initiation codons (ATG, TAC, ATC, and ATA). Only one PCG (nad6) and five tRNA genes (tRNA(Ser(UCN)),tRNA(Gln),tRNA(Ala),tRNA(Val),andtRNA(Asp)) were encoded on the light chain, and the other genes were encoded on the heavy chain. A phylogenetic tree constructed with 16S rRNA sequences showed thatH. fuscocinereais most closely related toH. leucospilota.
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