Complete Genome ofVibrio neocaledonicusCGJ02-2, An active Compounds Producing Bacterium Isolated from South China Sea
文献类型： 外文期刊
作者： Tan, Lin 1 ; Gomez-Betancur, Isabel 1 ; Guo, Suxia 1 ; Ge, Yu 1 ; Zhao, Jianping 3 ; Chen, Chang 4 ; Wang, Nan 1 ;
作者机构： 1.Chinese Acad Trop Agr Sci CATAS, Haikou Expt Stn, Haikou 571101, Hainan, Peoples R China
2.Univ Antioquia, Fac Ciencias Farmaceut & Alimentarias, Programa Ofidismo Escorpionismo, Medellin 1226, Colombia
3.Univ Mississippi, Thad Cochran Res Ctr, Sch Pharm, Natl Ctr Nat Prod Res, University, MS 38677 USA
4.Chinese Acad Sci, South China Sea Inst Oceanol, Key Lab Trop Marine Bioresources & Ecol, Guangzhou, Guangdong, Peoples R China
期刊名称：CURRENT MICROBIOLOGY （ 影响因子：2.188； 五年影响因子：2.197 ）
ISSN： 0343-8651
年卷期： 2020 年 77 卷 10 期
页码：
收录情况： SCI
摘要： Strain CGJ02-2 was isolated from the coral reefs in South China sea and deposited in South China Sea Institute of Oceanology, Chinese Academy of Sciences. Active compounds including indole, rho-hydroxybenzaldehyde were isolated from this strain. To explore the biosynthetic way of these compounds and search gene clusters, the complete genome of this strain was sequenced by Single Molecule, Real-Time (SMRT) technology. It was de novo assembled to two circular chromosomes of 3,400,283 bp with GC% 44.77 and 1,845,572 bp with GC% 44.59 respectively and classified asVibrio alginolyticus. In silico phenotype features ofVibrio alginolyticusCGJ02-2 were also analyzed. The biosynthetic pathway of rho-hydroxybenzaldehyde and indole in this strain were postulated. Gene clusters of four secondary metabolites including bacteriocin, ectoine, siderophore, arylpolyene were identified. This study provides helpful information for further utilizing Vibrio alginolyticus CGJ02-2 as a source of valuable bioactive compounds.
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