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Establishment of a porcine parvovirus (PPV) LAMP visual rapid detection method

文献类型： 外文期刊

作者： Zhao, Kai 2 ; Hu, Ruili 4 ; Ni, Jianping 6 ; Liang, Jieling 5 ; He, Xizhong 1 ; Du, Yanan 4 ; Xu, Yan 4 ; Zhao, Binan 7 ; Zh 1 ;

作者机构： 1.Shanghai Acad Agr Sci, Inst Anim Husb & Vet Sci, 2901 Beidi Rd, Shanghai 201106, Peoples R China

2.Shanghai Acad Agr Sci, Biotechnol Res Inst, 2901 Beidi Rd, Shanghai 201106, Peoples R China

3.Shanghai Acad Agr Sci, Key Lab Agr Genet & Breeding, 2901 Beidi Rd, Shanghai 201106, Peoples R China

4.Shanghai Normal Univ, Coll Life & Environm Sci, 100 Guilin Rd, Shanghai 200234, Peoples R China

5.Taizhou Univ, Sch Life Sci, Taizhou, Peoples R China

6.Shanghai Jiamu Biol Prod Co Ltd, 2901 Beidi Rd, Shanghai 201106, Peoples R China

7.Tongji Univ, Sch Med, Shanghai 200092, Peoples R China

关键词： Porcine parvovirus; Virus detection; LAMP

期刊名称：JOURNAL OF VIROLOGICAL METHODS （ 影响因子：2.014； 五年影响因子：2.001 ）

ISSN： 0166-0934

年卷期： 2020 年 284 卷

页码：

收录情况： SCI

摘要： Porcine parvovirus (PPV) is one of the major causes of reproductive pig disease. Due to its serious nature, wide spread and consequent great damage to the swine industry, an effective, rapid and convenient method for its detection is needed. A loop-mediated isothermal amplification (LAMP) assay was established to detect PPV infection. Two pairs of primers were specifically designed to recognize the six different sequences of open reading frame1 (ORF1) gene. The optimized LAMP program was as follows: 50 min at 59 degrees C followed by 3 min at 80 degrees C.The amplified products were analyzed both by visual inspection after staining with SYBR Green I dye and by conventional agarose gel electrophoresis. Both methods showed the same sensitivity. The limit of detection (LOD) for PPV by LAMP was 10 copies, which is 100-fold lower than conventional PCR. Our LAMP assay did not cross-react with other viruses. We used the established LAMP system to test 1100 field samples and detected 660 positives. The LAMP detection method for PPV represents a visual, sensitive and rapid assay which can detect the virus in the field, offering an attractive alternative for the PPV detection methods currently in use.

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