文献类型： 外文期刊
作者： Mei, Yu 1 ; Cai, Shike 1 ; Xu, Shiqiang 1 ; Gu, Yan 1 ; Zhou, Fang 1 ; Wang, Jihua 1 ;
作者机构： 1.Guangdong Acad Agr Sci, Crops Res Inst, Guangdong Key Lab Crops Genet Improvement, Guangzhou, Peoples R China
关键词： Alpinia chinensis; chloroplast genome; medicinal plant
期刊名称：MITOCHONDRIAL DNA PART B-RESOURCES （ 影响因子：0.658； 五年影响因子：0.674 ）
ISSN：
年卷期： 2020 年 5 卷 3 期
页码：
收录情况： SCI
摘要： Alpinia chinensis(Retz.) Rosc is one of Chinese tradition herbal medicine and edible plant in China. In this report, we sequenced the complete chloroplast genome ofA. chinensis. Through the assembly annotation of genome with high-throughput sequencing data, which help us to research the evolution. The length of chloroplast sequences was 163,590 bp with a large single-copy region (LSC) and a small single-copy region (SSC), also, two inverted repeat region A (IR), whose length was 88,951, 15,299, and 29,670 bp, respectively. A total of 138 genes were predicted in the complete chloroplast genome, with 36.4% GC content, including 93 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. From the phylogenetic analysis, we could conclude thatA. chinensis(Retz.) Rosc. was close toAlpinia oxyphyllain Zingiberaceae.
- 相关文献
作者其他论文 更多>>
-
Trans-cinnamaldehyde inhibits Escherichia coli growth by regulating lipopolysaccharide accumulation
作者：Xing, Huanling;Liu, Xiaomin;Lin, Jianhao;Huang, Junyi;Li, Xinghai;Li, Yanqun;Guo, Shining;Wu, Hong;Wu, Hong;Sun, Mingfei;Zhou, Fang
关键词：Trans-cinnamaldehyde; Resistant Escherichia coli; Susceptible Escherichia coli; Cell wall; LPS
-
Complete mitochondrial genome of Basilepta melanopus Lefèvre, 1893 (coleoptera: chrysomelidae: eumolpinae), a tea pest from Southern China
作者：Liao, Yonglin;Chen, Weiping;Fang, Yurong;Wang, Jihua;Wang, Jihua
关键词：Basilepta melanopus; next generation sequence; mitochondrial genome; tea pest; eumolpinae; phylogeny
-
Haplotype-resolved genomes of octoploid species in Phyllanthaceae family reveal a critical role for polyploidization and hybridization in speciation
作者：Li, Fangping;Hou, Zhuangwei;Xu, Shiqiang;Li, Bin;Cai, Shike;Gu, Yan;Mei, Yu;Wang, Jihua;Li, Fangping;Liu, Jieying;Gan, Zhenpeng;Zhang, Xiufeng;Zhou, Xiaofan;Wang, Shaokui;Li, Fangping;Wang, Zefu;Hou, Zhuangwei;Han, Danlu;Hu, Haifei;Zhao, Junliang;Hu, Haifei;Zhao, Junliang;Hu, Haifei;Zhao, Junliang;Zhang, Jisen
关键词：Phyllanthaceae; chromosome-scale haplotype-resolved genome; octoploid species; speciation; polyploidization; hybridization
-
The complete chloroplast genome sequence and phylogenetic analysis of the Bichetii grass Chlorophytum laxum (Asparagaceae)
作者：Li, Jingyu;Cai, Shike;Wang, Jihua;Li, Jingyu;Cai, Shike;Wang, Jihua;Lee, Shiou Yih;Hara, Yuka
关键词：Asparagales; genetic resources; next-generation sequencing; ornamental plant; phylogenomics; plastome
-
Efficient targeted mutagenesis in tetraploid Pogostemon cablin by the CRISPR/Cas9-mediated genomic editing system
作者：Xu, Shiqiang;Li, Fangping;Zhou, Fang;Li, Jingyu;Cai, Shike;Yang, Shaohai;Wang, Jihua;Xu, Shiqiang;Li, Fangping;Zhou, Fang;Li, Jingyu;Cai, Shike;Yang, Shaohai;Wang, Jihua
关键词：
-
Fungal community dynamics associated with the outbreaks of sugarcane root rot disease
作者：Ren, Qingxiao;Khan, Abdullah;Zhang, Jinxu;Bao, Yixue;Zhang, Muqing;Khan, Muhammad Tahir;Wang, Jihua;Xu, Shiqiang
关键词：sugarcane; root rot disease; Fusarium; antagonistic fungi; biocontrol
-
Genome-Wide Identification of SnRK1 Catalytic alpha Subunit and FLZ Proteins in Glycyrrhiza inflata Bat. Highlights Their Potential Roles in Licorice Growth and Abiotic Stress Responses
作者：Yang, Chao;Shi, Guangyu;Li, Yuping;Luo, Ming;Wang, Ying;Li, Yongqing;Yang, Chao;Shi, Guangyu;Li, Yuping;Luo, Ming;Wang, Ying;Li, Yongqing;Yang, Chao;Shi, Guangyu;Li, Yuping;Luo, Ming;Wang, Ying;Li, Yongqing;Wang, Hongxia;Wang, Jihua;Yuan, Ling;Wang, Ying
关键词：SnRK1; FLZ; Glycyrrhiza inflata; stress response; growth
