Combined transcriptomic and metabolomic analysis revealed the salt tolerance mechanism of Populus talassica x Populus euphratica
文献类型: 外文期刊
作者: Liu, Ying 1 ; Su, Mengxu 1 ; Zhao, Xiaoqing 2 ; Liu, Meilin 1 ; Wu, Jiaju 1 ; Wu, Xiaofeng 1 ; Lu, Zhanyuan 2 ; Han, Zhanjiang 1 ;
作者机构: 1.Tarim Univ, Coll Life Sci & Technol, State Key Lab Incubat Base Conservat & Utilizat Bi, Alar 843300, Peoples R China
2.Inner Mongolia Univ, Sch Life Sci, Hohhot 010020, Peoples R China
3.Inner Mongolia Acad Agr & Anim Husb Sci, Hohhot 010031, Peoples R China
关键词:
期刊名称:BMC PLANT BIOLOGY ( 影响因子:4.8; 五年影响因子:5.4 )
ISSN: 1471-2229
年卷期: 2025 年 25 卷 1 期
页码:
收录情况: SCI
摘要: BackgroundTo investigate the salt tolerance of Populus talassica x Populus euphratica, morphological and physiological parameters were measured on the second day after the 15th, 30th and 45th days of NaCl treatment, revealing significant effects of NaCl on growth. To further elucidate the mechanisms underlying salt tolerance, transcriptomic and metabolomic analysis were conducted under different NaCl treatments.ResultsThe results of morphological and physiological indexes showed that under low salt treatment, P. talassica x P. euphratica was able to coordinate the growth of aboveground and belowground parts. Under high salt concentration, the growth and water balance of P. talassica x P. euphratica were markedly inhibited. The most significant differences between treatments were observed on the second day after the 45th day of NaCl treatment.Transcriptomic analysis showed that the pathways of gene enrichment in the roots and stems of P. talassica x P. euphratica were different in the salt resistance response. And it involves several core pathways such as plant hormone signal transduction, phenylpropanoid biosynthesis, MAPK signaling pathway-plant, plant- pathogen interaction, carbon metabolism, biosynthesis of amino acids, and several key Transcription factors (TFs) such as AP2/ERF, NAC, WRKY and bZIP.Metabolomic analysis revealed that KEGG pathway enrichment analysis showed unique metabolic pathways were enriched in P. talassica x P. euphratica under both 200 mM and 400 mM NaCl treatments. Additionally, while there were some differences in the metabolic pathways enriched in the roots and stems, both tissues commonly enriched pathways related to the biosynthesis of secondary metabolites, biosynthesis of cofactors, biosynthesis of amino acids, flavonoid biosynthesis, and ABC transporters.Association analysis further indicated that biosynthesis of amino acids and plant hormone signal transduction pathway play key roles in the response of P. talassica x P. euphratica to salt stress. The interactions between the differentially expressed genes (DEGs) and several differentially accumulated metabolites (DAMs), especially the strong association between LOC105124002 and Jasmonoyl-L-Isoleucine (pme2074), were again revealed by the interactions analysis.ResultsThe results of morphological and physiological indexes showed that under low salt treatment, P. talassica x P. euphratica was able to coordinate the growth of aboveground and belowground parts. Under high salt concentration, the growth and water balance of P. talassica x P. euphratica were markedly inhibited. The most significant differences between treatments were observed on the second day after the 45th day of NaCl treatment.Transcriptomic analysis showed that the pathways of gene enrichment in the roots and stems of P. talassica x P. euphratica were different in the salt resistance response. And it involves several core pathways such as plant hormone signal transduction, phenylpropanoid biosynthesis, MAPK signaling pathway-plant, plant- pathogen interaction, carbon metabolism, biosynthesis of amino acids, and several key Transcription factors (TFs) such as AP2/ERF, NAC, WRKY and bZIP.Metabolomic analysis revealed that KEGG pathway enrichment analysis showed unique metabolic pathways were enriched in P. talassica x P. euphratica under both 200 mM and 400 mM NaCl treatments. Additionally, while there were some differences in the metabolic pathways enriched in the roots and stems, both tissues commonly enriched pathways related to the biosynthesis of secondary metabolites, biosynthesis of cofactors, biosynthesis of amino acids, flavonoid biosynthesis, and ABC transporters.Association analysis further indicated that biosynthesis of amino acids and plant hormone signal transduction pathway play key roles in the response of P. talassica x P. euphratica to salt stress. The interactions between the differentially expressed genes (DEGs) and several differentially accumulated metabolites (DAMs), especially the strong association between LOC105124002 and Jasmonoyl-L-Isoleucine (pme2074), were again revealed by the interactions analysis.ResultsThe results of morphological and physiological indexes showed that under low salt treatment, P. talassica x P. euphratica was able to coordinate the growth of aboveground and belowground parts. Under high salt concentration, the growth and water balance of P. talassica x P. euphratica were markedly inhibited. The most significant differences between treatments were observed on the second day after the 45th day of NaCl treatment.Transcriptomic analysis showed that the pathways of gene enrichment in the roots and stems of P. talassica x P. euphratica were different in the salt resistance response. And it involves several core pathways such as plant hormone signal transduction, phenylpropanoid biosynthesis, MAPK signaling pathway-plant, plant- pathogen interaction, carbon metabolism, biosynthesis of amino acids, and several key Transcription factors (TFs) such as AP2/ERF, NAC, WRKY and bZIP.Metabolomic analysis revealed that KEGG pathway enrichment analysis showed unique metabolic pathways were enriched in P. talassica x P. euphratica under both 200 mM and 400 mM NaCl treatments. Additionally, while there were some differences in the metabolic pathways enriched in the roots and stems, both tissues commonly enriched pathways related to the biosynthesis of secondary metabolites, biosynthesis of cofactors, biosynthesis of amino acids, flavonoid biosynthesis, and ABC transporters.Association analysis further indicated that biosynthesis of amino acids and plant hormone signal transduction pathway play key roles in the response of P. talassica x P. euphratica to salt stress. The interactions between the differentially expressed genes (DEGs) and several differentially accumulated metabolites (DAMs), especially the strong association between LOC105124002 and Jasmonoyl-L-Isoleucine (pme2074), were again revealed by the interactions analysis.ResultsThe results of morphological and physiological indexes showed that under low salt treatment, P. talassica x P. euphratica was able to coordinate the growth of aboveground and belowground parts. Under high salt concentration, the growth and water balance of P. talassica x P. euphratica were markedly inhibited. The most significant differences between treatments were observed on the second day after the 45th day of NaCl treatment.Transcriptomic analysis showed that the pathways of gene enrichment in the roots and stems of P. talassica x P. euphratica were different in the salt resistance response. And it involves several core pathways such as plant hormone signal transduction, phenylpropanoid biosynthesis, MAPK signaling pathway-plant, plant- pathogen interaction, carbon metabolism, biosynthesis of amino acids, and several key Transcription factors (TFs) such as AP2/ERF, NAC, WRKY and bZIP. Metabolomic analysis revealed that KEGG pathway enrichment analysis showed unique metabolic pathways were enriched in P. talassica x P. euphratica under both 200 mM and 400 mM NaCl treatments. Additionally, while there were some differences in the metabolic pathways enriched in the roots and stems, both tissues commonly enriched pathways related to the biosynthesis of secondary metabolites, biosynthesis of cofactors, biosynthesis of amino acids, flavonoid biosynthesis, and ABC transporters.Association analysis further indicated that biosynthesis of amino acids and plant hormone signal transduction pathway play key roles in the response of P. talassica x P. euphratica to salt stress. The interactions between the differentially expressed genes (DEGs) and several differentially accumulated metabolites (DAMs), especially the strong association between LOC105124002 and Jasmonoyl-L-Isoleucine (pme2074), were again revealed by the interactions analysis.ConclusionsIn this study, we resolved the changes of metabolic pathways in roots and stems of P. talassica x P. euphratica under different NaCl treatments and explored the associations between characteristic DEGs and DAMs, which provided insights into the mechanisms of P. talassica x P. euphratica in response to salt stress.
- 相关文献
作者其他论文 更多>>
-
Assessing the ecological effects of the World's Largest Forestry Eco-engineering: Three-North Protective Forest Program within the initially scheduled range from 1978 to 2022
作者:Zheng, Xiao;Zhu, Jiaojun;Wang, G. Geoff;Yan, Qiaoling;Sun, Tao;Song, Lining;Gao, Tian;Sun, Yirong;Yang, Kai;Zhang, Jinxin;Yu, Lizhong;Qi, Ke;Zhao, Lanlin;Lu, Deliang;Zheng, Xiao;Zhu, Jiaojun;Yan, Qiaoling;Sun, Tao;Song, Lining;Gao, Tian;Sun, Yirong;Yang, Kai;Zhang, Jinxin;Yu, Lizhong;Qi, Ke;Lu, Deliang;Wang, G. Geoff;Li, Xiufen;Zhao, Lanlin;Lu, Zhanyuan
关键词:Three-North Program; northern China; protective forest; ecological impacts; 45 years
-
Contamination of aflatoxin B1, deoxynivalenol and zearalenone in feeds in China from 2021 to 2024
作者:Liu, Meng;Xia, Zhiyuan;Sun, Hua;He, Jiangfeng;Sun, Lvhui;Liu, Meng;Xia, Zhiyuan;Zhang, Yu;Lamesgen, Dessalegn;Sun, Lvhui;Yang, Rengui;Luo, Weicai;Guo, Lijia;Liu, Ying
关键词:Aflatoxin B-1; China; Contamination; Deoxynivalenol; Feeds; Zearalenone
-
Degradable film mulching recruited beneficial microbiota and increased rhizosphere bacterial diversity in sunflower
作者:Meng, Tiantian;Lu, Zhanyuan;Meng, Tiantian;Zhang, Xiangqian;Zhang, Jianwei;Lu, Zhanyuan;Zhao, Xiaoyu;Bu, Hengtong;Chen, Xuanyi;Zhao, Min;Zhang, Dejian;Lu, Zhanyuan;Wang, Weini;Liu, Junmei;Zhang, Xiangqian;Lu, Zhanyuan
关键词:Degradation film; Sunflower; Root niche; Microbial community assembly; Yield
-
Cry for help from rhizosphere microbiomes and self-rescue strategies cooperatively alleviate drought stress in spring wheat
作者:Fang, Jing;Ma, Jie;Wei, Shuli;Su, Shaofeng;Cheng, Yuchen;Zhao, Xiaoqing;Lu, Zhanyuan;Fang, Jing;Ma, Jie;Zhao, Xiaoqing;Lu, Zhanyuan;Wen, Tao;Niu, Guoqing;Yuan, Jun;Yi, Liuxi
关键词:Drought stress; Spring wheat; Rhizosphere microbiome; Root exudate; Root transcriptome; Cross-domain network
-
ggClusterNet 2: An R package for microbial co-occurrence networks and associated indicator correlation patterns
作者:Wen, Tao;Liu, Lanlan;Niu, Guoqing;Ding, Zhexu;Teng, Xinyang;Yang, Shengdie;Xie, Penghao;Zhang, Tianjiao;Shen, Qirong;Yuan, Jun;Liu, Yong-Xin;Ma, Jie;Liu, Ying;Zhang, Tianjiao;Lu, Zhanyuan;Wang, Lei
关键词:microbial co-occurrence networks; modularity; multi-omics network; multi-network comparison; network visualization; transkingdom networks
-
Can quinoa (Chenopodium quinoa) replace traditional cereals under current climate scenarios?
作者:Sun, Hongju;Lu, Zhanyuan;Sun, Hongju;Khan, Waqas ud Din;Tanveer, Mohsin;Khan, Waqas ud Din;Shabala, Sergey;Khan, Waqas ud Din;Ijaz, Usman;Lu, Zhanyuan;Lu, Zhanyuan;Shabala, Sergey
关键词:salinity; drought; food security; climate change; abiotic stress; adaptation
-
Effects of Tillage Methods on Carbon and Nitrogen Sequestration and Soil Microbial Stoichiometric Equilibrium in a Black Soil Farmland with Full Return of Straw to the Field
作者:Rong, Meiren;Wang, Zhigang;Bai, Lanfang;Cheng, Zhipeng;Wang, Tianhao;Zhang, Yajing;Zhang, Xiangqian;Lu, Zhanyuan;Liang, Hongwei;Meng, Tiantian;Zhang, Xiangqian;Lu, Zhanyuan;Meng, Tiantian;Liu, Lingyue;Luo, Fang
关键词:soil physico-chemical and biological properties; soil microbial quotient; soil carbon and nitrogen balance; maize yield



