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Genomic insight into domestication of rubber tree

文献类型: 外文期刊

作者: Chao, Jinquan 1 ; Wu, Shaohua 1 ; Shi, Minjing 1 ; Xu, Xia 4 ; Gao, Qiang 5 ; Du, Huilong 4 ; Gao, Bin 9 ; Guo, Dong 10 ; Yang, Shuguang 1 ; Zhang, Shixin 1 ; Li, Yan 3 ; Fan, Xiuli 4 ; Hai, Chunyan 4 ; Kou, Liquan 4 ; Zhang, Jiao 11 ; Wang, Zhiwei 11 ; Li, Yan 3 ; Xue, Wenbo 11 ; Xu, Jiang 12 ; Deng, Xiaomin 1 ; Huang, Xiao 2 ; Gao, Xinsheng 1 ; Zhang, Xiaofei 1 ; Hu, Yanshi 1 ; Zeng, Xia 1 ; Li, Weiguo 1 ; Zhang, Liangsheng 5 ; Peng, Shiqing 10 ; Wu, Jilin 2 ; Hao, Bingzhong 2 ; Wang, Xuchu 13 ; Yu, Hong 4 ; Li, Jiayang 4 ; Liang, Chengzhi 4 ; Tian, Wei-Min 1 ;

作者机构: 1.Chinese Acad Trop Agr Sci, Natl Key Lab Trop Crop Breeding, Sanya 572024, Peoples R China

2.Chinese Acad Trop Agr Sci, Minist Agr & Rural Affairs, Rubber Res Inst, Key Lab Biol & Genet Resources Rubber Tree, Haikou 571101, Peoples R China

3.Chinese Acad Trop Agr Sci, Rubber Res Inst, State Key Lab Breeding Base Cultivat & Physiol Tr, Haikou 571101, Peoples R China

4.Chinese Acad Sci, Inst Genet & Dev Biol, Innovat Acad Seed Design, State Key Lab Plant Genom, Beijing 100101, Peoples R China

5.Zhejiang Univ, Coll Agr & Biotechnol, Genom & Genet Engn Lab Ornamental Plants, Hangzhou 310058, Peoples R China

6.Qi Biodesign, Life Sci Pk, Beijing 100101, Peoples R China

7.Hebei Univ, Inst Life Sci & Green Dev, Sch Life Sci, Baoding 071002, Peoples R China

8.Univ Chinese Acad Sci, Beijing 100049, Peoples R China

9.Chinese Acad Sci, Inst Zool, Key Lab Anim Ecol & Conservat Biol, Beijing 100101, Peoples R China

10.Chinese Acad Trop Agr Sci, Inst Trop Biosci & Biotechnol, Key Lab Trop Crop Biotechnol, Minist Agr & Rural Affairs, Haikou 571101, Peoples R China

11.BGI Shenzhen, BGI Genom, Shenzhen 518083, Peoples R China

12.Chin Acad Chinese Med Sci, Inst Chinese Mat Med, Beijing 100700, Peoples R China

13.Guizhou Univ, Inst Agrobioengn, Coll Life Sci, Key Lab Plant Resources Conservat & Germplasm Inn, Guiyang 550025, Peoples R China

14.Hainan Yazhou Bay Seed Lab, Sanya 572024, Peoples R China

期刊名称:NATURE COMMUNICATIONS ( 影响因子:16.6; 五年影响因子:17.0 )

ISSN:

年卷期: 2023 年 14 卷 1 期

页码:

收录情况: SCI

摘要: Understanding the genetic basis of rubber tree (Hevea brasiliensis) domestication is crucial for further improving natural rubber production to meet its increasing demand worldwide. Here we provide a high-quality H. brasiliensis genome assembly (1.58 Gb, contig N50 of 11.21 megabases), present a map of genome variations by resequencing 335 accessions and reveal domestication-related molecular signals and a major domestication trait, the higher number of laticifer rings. We further show that HbPSK5, encoding the small-peptide hormone phytosulfokine (PSK), is a key domestication gene and closely correlated with the major domestication trait. The transcriptional activation of HbPSK5 by myelocytomatosis (MYC) members links PSK signaling to jasmonates in regulating the laticifer differentiation in rubber tree. Heterologous overexpression of HbPSK5 in Russian dandelion (Taraxacum kok-saghyz) can increase rubber content by promoting laticifer formation. Our results provide an insight into target genes for improving rubber tree and accelerating the domestication of other rubber-producing plants. Understanding the genetic basis of rubber tree domestication is critical for improving natural rubber production. Here, the authors assemble the genome of the rubber tree clone CATAS8-79 and conduct population and genetic association analyses to reveal the function of phytosulfokine in regulating number of laticifer rings.

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