Molecular genetic identification of Wuzhishan ant chicken, a newly discovered resource in China
文献类型： 外文期刊
作者： Gu, Lihong 1 ; Wu, Fanghu 2 ; Zheng, Xinli 1 ; Zhang, Xiaohui 2 ; Chen, Yanmin 3 ; Lu, Lizhi 4 ; Liu, Xiangxiang 3 ; Mo, Shuhui 3 ; Chao, Zhe 1 ; He, Zhongchun 1 ; Shang, Yuanyuan 2 ; Wei, Dong 5 ; Wei, Sheng 5 ; Chen, Youyi 3 ; Xu, Tieshan 6 ;
作者机构： 1.Hainan Acad Agr Sci, Inst Anim Sci & Vet Med, Haikou, Peoples R China
2.Henan Univ Sci & Technol, Coll Anim Sci & Technol, Luoyang, Peoples R China
3.Wuzhishan Agr & Rural Bur, Wuzhishan Anim Sci & Vet Med & Fishery Serv Ctr, Wuzhishan, Peoples R China
4.Zhejiang Acad Agr Sci, Inst Anim Husb & Vet Sci, Hangzhou, Peoples R China
5.Wuzhishan Ant Chicken Cooperat, Wuzhishan, Peoples R China
6.Chinese Acad Trop Agr Sci, Trop Crops Genet Resources Inst, Haikou, Peoples R China
关键词： Wuzhishan ant chicken; genetic diversity; whole-genome resequencing; genetic structure; genetic resource
期刊名称：FRONTIERS IN VETERINARY SCIENCE （ 影响因子：2.6； 五年影响因子：3.1 ）
ISSN：
年卷期： 2024 年 11 卷
页码：
收录情况： SCI
摘要： Introduction The Wuzhishan ant (MY) chicken exhibits significant differences from other chicken breeds. However, the molecular genetic relationship between the MY breed and other chicken breeds has not been assessed.Methods Whole-genome resequencing was used to compare genetic diversity, nucleotide diversity, the fixation index, the linkage disequilibrium coefficient, and phylogenetic tree relationships between the MY breed and the Wenchang (WC), Danzhou (DZ), Bawangling (BW), and Longsheng Feng (LF) breeds.Results A total of 21,586,378 singlenucleotide polymorphisms and 4,253,341 insertions/deletions were screened out among the five breeds. The MY breed had the second highest genomic genetic diversity and nucleotide diversity and the lowest LD coefficient among the five breeds. Moreover, the phylogenetic tree analysis showed that individual birds of each breed clustered together with those of their respective breeds.Discussion Our data indicated that the MY breed is distinct from the other breeds and can be considered a new genetic resource.
- 相关文献
作者其他论文 更多>>
-
Sucrose-phosphate osmotic system improves the quality characteristics of reduced-salt salted egg yolk: Profiling from protein structure and lipid distribution perspective
作者：Li, Qiqi;Jin, Haobo;Xia, Minquan;Sun, Haoyang;Cai, Zhaoxia;Wang, Yulin;Cai, Zhaoxia;Zeng, Tao;Lu, Lizhi;Cai, Zhaoxia
关键词：Salted egg yolk; High permeability system; Protein structure; Physicochemical property; Reduced-salt pickling
-
Proteomic-metabolomic combination analysis reveals novel biomarkers of meat quality that differ between young and older ducks
作者：Gu, Tiantian;Duan, Mingcai;Chen, Li;Tian, Yong;Xu, Wenwu;Zeng, Tao;Lu, Lizhi
关键词：meat quality; young duck; older duck; proteomics; metabolomics
-
Cell Heterogeneity Analysis Revealed the Key Role of Fibroblasts in the Magnum Regression of Ducks
作者：Du, Xue;Wang, Zhijun;Zhao, Ayong;Du, Xue;Wang, Zhijun;Zhao, Ayong;Xu, Xiaoqin;Liu, Yali;Lu, Lizhi
关键词：ceased-laying duck; oviduct regression; THY1; TIMP4; cell heterogeneity
-
High temperature curing softening salted egg yolk: Insights on microstructure, texture properties and composition of key protein
作者：Sun, Jing;Wu, Yan;Zeng, Qi;Liu, Wenhao;Du, Jinping;Pi, Jinsong;Lu, Lizhi;Zeng, Tao;Harlina, Putri Widyanti;Yang, Fang
关键词：Proteomics; Lipoprotein; Rheological property; Aggregation; Protein oxidation
-
Programmed cell death and Salmonella pathogenesis: an interactive overview
作者：Zhang, Yu;Chen, Li;Lu, Lizhi;Zhang, Yu;Xu, Maodou;Guo, Yujiao;Xu, Qi;Vongsangnak, Wanwipa
关键词：programmed cell death; salmonella; apoptosis; pyroptosis; necroptosis; autophagy
-
Integrated transcriptome and microbiome analyses of residual feed intake in ducks during high production period
作者：Chang, Yuguang;Guo, Rongbing;Gu, Tiantian;Zong, Yibo;Sun, Hanxue;Xu, Wenwu;Chen, Li;Tian, Yong;Li, Guoqin;Lu, Lizhi;Zeng, Tao;Chang, Yuguang;Guo, Rongbing;Gu, Tiantian;Zong, Yibo;Sun, Hanxue;Xu, Wenwu;Chen, Li;Tian, Yong;Li, Guoqin;Lu, Lizhi;Zeng, Tao;Chang, Yuguang;Guo, Rongbing;Gu, Tiantian;Zong, Yibo;Sun, Hanxue;Xu, Wenwu;Chen, Li;Tian, Yong;Li, Guoqin;Lu, Lizhi;Zeng, Tao;Guo, Rongbing;Sun, Hanxue
关键词：transcriptomic; microorganisms; RFI; duck
-
Genome-wide association study identified candidate genes for egg production traits in the Longyan Shan-ma duck
作者：Sun, Yanfa;Li, Yan;Wu, Qiong;Zhang, Min;Xu, Enrong;Zhang, Yeqiong;Jiang, Xiaobing;Lin, Rulong;Chen, Hongping;Zeng, Tao;Lu, Lizhi
关键词：duck; GWAS; egg weight; egg number; candidate gene
