Identification and Expression Analysis of the Alfin-like Gene Family in Tomato and the Role of SlAL3 in Salt and Drought Stresses
文献类型： 外文期刊
作者： Jin, Ruixin 1 ; Wang, Juan 1 ; Guo, Bin 3 ; Yang, Tao 2 ; Hu, Jiahui 2 ; Wang, Baike 2 ; Yu, Qinghui 1 ;
作者机构： 1.Xinjiang Univ, Coll Life Sci & Technol, Urumqi 830046, Peoples R China
2.Xinjiang Acad Agr Sci, Key Lab GenomeRes & Genet Improvement Xinjiang Cha, Inst Hort Crops, Urumqi 830091, Peoples R China
3.State Key Lab Genet Improvement & Germplasm Innova, Urumqi 830091, Peoples R China
4.Xinjiang Agr Univ, Coll Comp & Informat Engn, Urumqi 830052, Peoples R China
关键词： AL transcription factor; tomato; evolutionary analyses; expression patterns; abiotic stresses; SlAL3
期刊名称：PLANTS-BASEL （ 2022影响因子：4.5； 五年影响因子：4.8 ）
年卷期： 2023 年 12 卷 15 期
收录情况： SCI
摘要： Alfin-like (AL) transcription factors are a family of plant-specific genes with a PHD-finger-like structural domain at the C-terminus and a DUF3594 structural domain at the N-terminus that play important roles in plant development and stress response. In the present study, genome-wide identification and analysis were performed of the AL protein family in cultivated tomato (Solanum lycopersicum) and three wild relatives (S. pennellii, S. pimpinellifolium, and S. lycopersicoides) to evaluate their response to different abiotic stresses. A total of 39 ALs were identified and classified into four groups and based on phylogenetic tree and evolutionary analysis were shown to have formed prior to the differentiation of monocotyledons and dicots. Moreover, cis-acting element analysis revealed that various phytohormone response and abiotic stress response elements were highly existed in tomato. In addition, further analysis of the SlAL3 gene revealed that its expression was induced by drought and salt stresses and localized to the nucleus. In conclusion, our findings concerning AL genes provide useful information for further studies on their functions and regulatory mechanisms and provide theoretical references for studying AL gene response to abiotic stresses in plants.
- 相关文献
作者其他论文 更多>>
-
Editing and genome-wide analysis upstream open reading frames contributes to enhancing salt tolerance in tomato
作者：Jia, Chunping;Wang, Juan;Guo, Bin;Yang, Tao;Yang, Haitao;Wang, Baike;Yu, Qinghui;Jia, Chunping;Yu, Qinghui;Guo, Bin
关键词：uORFs; gene editing; Ribo-seq; translational regulation; salt stress
-
Identification and Analysis of the Expression of the PIP5K Gene Family in Tomatoes
作者：Wang, Zepeng;Wang, Zhongyu;Li, Xianguo;Chen, Zhaolong;Liu, Yuxiang;Zhang, Fulin;Dai, Qi;Yu, Qinghui;Li, Ning;Wang, Zepeng;Wang, Zhongyu;Li, Xianguo;Chen, Zhaolong;Liu, Yuxiang;Zhang, Fulin;Dai, Qi;Yu, Qinghui;Li, Ning;Wang, Zepeng;Li, Xianguo;Chen, Zhaolong;Liu, Yuxiang;Zhang, Fulin
关键词：tomato; PIP5K gene family; fruit development; salt stress; expression analysis
-
Involvement of Alfin-Like Transcription Factors in Plant Development and Stress Response
作者：Jin, Ruixin;Yang, Haitao;Muhammad, Tayeb;Li, Xin;Tuerdiyusufu, Diliaremu;Wang, Baike;Wang, Juan;Jin, Ruixin;Wang, Juan;Li, Xin;Tuerdiyusufu, Diliaremu
关键词：Alfin-like transcription factors; structural characteristics; growth and development; abiotic stress
-
Functional analysis of fasciclin-like arabinogalactan in carotenoid synthesis during tomato fruit ripening
作者：Hu, Jiahui;Wang, Juan;Muhammad, Tayeb;Tuerdiyusufu, Diliaremu;Yang, Tao;Li, Ning;Yang, Haitao;Wang, Baike;Yu, Qinghui;Hu, Jiahui;Yu, Qinghui;Tuerdiyusufu, Diliaremu
关键词：Carotenoid; FLA; Genome-wide identification; Evolutionary analyses; Expression patterns; VIGS
-
Integrative Analysis of Metabolome and Transcriptome of Carotenoid Biosynthesis Reveals the Mechanism of Fruit Color Change in Tomato (Solanum lycopersicum)
作者：Hu, Jiahui;Yu, Qinghui;Hu, Jiahui;Wang, Juan;Muhammad, Tayeb;Yang, Tao;Li, Ning;Yang, Haitao;Yu, Qinghui;Wang, Baike
关键词：tomato; fruit ripening; metabolome; transcriptome; carotenoids; lycopene; ethenyl
-
Comprehensive genomic characterization and expression analysis of calreticulin gene family in tomato
作者：Muhammad, Tayeb;Yang, Tao;Wang, Baike;Yang, Haitao;Wang, Juan;Yu, Qinghui;Tuerdiyusufu, Diliaremu
关键词：tomato; CRT gene family; endoplasmic reticulum; bioinformatics; abiotic stress; gene expression
-
Transcriptomics and Metabolomics Analysis Provides Insight into Leaf Color and Photosynthesis Variation of the Yellow-Green Leaf Mutant of Hami Melon (Cucumis melo L.)
作者：Han, Hongwei;Chen, Xianjun;Sun, Xiaoxia;Liu, Huiying;Han, Hongwei;Liu, Huifang;Wang, Qiang;Zhuang, Hongmei;Wang, Baike;Wang, Juan;Tang, Yaping;Wang, Hao;Zhou, Yuan;Ling, Qihua;Zhang, Huijun
关键词：Hami melon mutant; chloroplast; photosynthesis; photosynthetic carbon assimilation; ROS; transcriptome; metabolism
