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Classes and phyla of the kingdom Fungi

文献类型: 外文期刊

作者: Wijayawardene, Nalin N. 1 ; Hyde, Kevin D. 4 ; Mikhailov, Kirill V. 8 ; Peter, Gabor 10 ; Aptroot, Andre 11 ; Pires-Zottarelli, Carmen L. A. 12 ; Goto, Bruno T. 13 ; Tokarev, Yuri S. 14 ; Haelewaters, Danny 15 ; Karunarathna, Samantha C. 1 ; Kirk, Paul M. 18 ; Santiago, Andre L. C. M. de A. 19 ; Saxena, Ramesh K. 20 ; Schoutteten, Nathan 21 ; Wimalasena, Madhara K. 3 ; Aleoshin, Vladimir V. 8 ; Al-Hatmi, Abdullah M. S. 23 ; Ariyawansa, Kahandawa G. S. U. 24 ; Assuncao, Amanda R. 13 ; Bamunuarachchige, Thushara C. 3 ; Baral, Hans-Otto 25 ; Bhat, D. Jayarama 26 ; Blaszkowski, Janusz 28 ; Boekhout, Teun 29 ; Boonyuen, Nattawut 30 ; Brysch-Herzberg, Michael 31 ; Cao, Bin 32 ; Cazabonne, Jonathan 33 ; Chen, Xue-Mei 1 ; Coleine, Claudia 35 ; Dai, Dong-Qin 1 ; Daniel, Heide-Marie 36 ; da Silva, Suzana B. G. 19 ; de Souza, Francisco Adriano 37 ; Dolatabadi, Somayeh 38 ; Dubey, Manish K. 39 ; Dutta, Arun K. 40 ; Ediriweera, Aseni 2 ; Egidi, Eleonora 42 ; Elshahed, Mostafa S. 44 ; Fan, Xinlei 45 ; Felix, Juliana R. B. 13 ; Galappaththi, Mahesh C. A. 47 ; Groenewald, Marizeth 48 ; Han, Li-Su 1 ; Huang, Bo 49 ; Hurdeal, Vedprakash G. 50 ; Ignatieva, Anastasia N. 14 ; Jeronimo, Gustavo H. 12 ; de Jesus, Ana L. 12 ; Kondratyuk, Serhii 51 ; Kumla, Jaturong 53 ; Kukwa, Martin 55 ; Li, Qirui 56 ; Lima, Juliana L. R. 13 ; Liu, Xiao-Yong 58 ; Lu, Wenhua 1 ; Lumbsch, H. Thorsten 59 ; Madrid, Hugo 60 ; Magurno, Franco 61 ; Marson, Guy 62 ; McKenzie, Eric H. C. 63 ; Menkis, Audrius 64 ; Mesic, Armin 65 ; Nascimento, Elaine C. R. 13 ; Nassonova, Elena S. 66 ; Nie, Yong 67 ; Oliveira, Naasson V. L. 13 ; Ossowska, Emilia A. 55 ; Pawlowska, Julia 68 ; Peintner, Ursula 69 ; Pozdnyakov, Igor R. 70 ; Premarathne, Bhagya M. 71 ; Priyashantha, A. K. Hasith 72 ; Quandt, C. Alisha 16 ; Queiroz, Mariana B. 13 ; Rajeshkumar, Kunhiraman C. 74 ; Raza, Mubashar 75 ; Roy, Niranjan 40 ; Samarakoon, Milan C. 76 ; Santos, Alessandra A. 13 ; Santos, Lidiane A. 77 ; Schumm, Felix 78 ; Selbmann, Laura 35 ; Selcuk, Faruk 80 ; Simmons, D. Rabern 81 ; Simakova, Anastasia V. 82 ; Smith, Maudy Th. 48 ; Sruthi, Onden Paraparath 74 ; Suwannarach, Nakarin 53 ; Tanaka, Kazuaki 83 ; Tibpromma, Saowaluck 1 ; Tomas, Elias O. 13 ; Ulukapi, Merve 80 ; Van Vooren, Nicolas 84 ; Wanasinghe, Dhanushka N. 85 ; Weber, Evi 24 ; Wu, Qianzhen 56 ; Yang, Er Fu 1 ; Yoshioka, Ryuichi 83 ; Youssef, Noha H. 44 ; Zandijk, Annemarie 48 ; Zhang, Gui-Qing 1 ; Zhang, Jin-Yong 86 ; Zhao, Heng 87 ; Zhao, RuiLin 32 ; Zverkov, Oleg A. 9 ; Thines, Marco 88 ; Karpov, Sergey A. 70 ;

作者机构: 1.Qujing Normal Univ, Coll Biol Resource & Food Engn, Ctr Yunnan Plateau Biol Resources Protect & Utili, Qujing 655011, Yunnan, Peoples R China

2.Trop Microbiol Res Fdn, 96-N-10 Meemanagoda Rd, Pannipitiya 10230, Sri Lanka

3.Rajarata Univ, Fac Technol, Dept Bioprocess Technol, Mihintale, Sri Lanka

4.Mae Fah Luang Univ, Ctr Excellence Fungal Res, Chiang Rai 57100, Thailand

5.Mae Fah Luang Univ, Sch Sci, Chiang Rai 57100, Thailand

6.Zhongkai Univ Agr & Engn, Innovat Inst Plant Hlth, Guangzhou 510225, Peoples R China

7.Chinese Acad Sci, Kunming Inst Bot, CAS Key Lab Plant Biodivers & Biogeog East Asia K, Kunming, Yunnan, Peoples R China

8.Lomonosov Moscow State Univ, Belozersky Inst Physicochem Biol, Leninskye Gory 1,Build 40, Moscow 119991, Russia

9.Russian Acad Sci, Kharkevich Inst Informat Transmiss Problems, Moscow 127051, Russia

10.Hungarian Univ Agr & Life Sci, Natl Collect Agr & Ind Microorganisms, Inst Food Sci & Technol, Somloi Ut 14-16, H-1118 Budapest, Hungary

11.Univ Fed Mato Grosso do Sul, Inst Biociencias, Ave Costa e Silva S-N, BR-79070900 Campo Grande, MS, Brazil

12.Secretaria Meio Ambiente Infraestrutura & Logist, Inst Pesquisas Ambientais, Ave Miguel Stefano 3687, BR-04301902 Sao Paulo, SP, Brazil

13.Univ Fed Rio Grande do Norte, Dept Bot & Zool, Campus Univ, BR-59078900 Natal, RN, Brazil

14.All Russian Inst Plant Protect, Sh Podbelskogo 3, St Petersburg 196608, Russia

15.Univ Ghent, Res Grp Mycol, Dept Biol, B-9000 Ghent, Belgium

16.Univ South Bohemia, Fac Sci, Ceske Budejovice 37005, Czech Republic

17.Univ Colorado, Dept Ecol & Evolutionary Biol, Boulder, CO 80309 USA

18.Royal Bot Gardens, Biodivers Informat & Spatial Anal, Jodrell Lab, Richmond TW9 3AB, Surrey, England

19.Univ Fed Pernambuco, Dept Micol, Ctr Biociencias, Ave Prof Nelson Chaves S-N, BR-50670420 Recife, PE, Brazil

20.Birbal Sahni Inst Palaeosci, 53 Univ Rd, Lucknow 226007, Uttar Pradesh, India

21.Univ Ghent, Res Grp Mycol, Dept Biol, KL Ledeganckstr 35, B-9000 Ghent, Belgium

22.Sabaragamuwa Univ Sri Lanka, Fac Grad Studies, Belihuloya 70140, Sri Lanka

23.Univ Nizwa, Nat & Med Sci Res Ctr, Nizwa 616, Oman

24.Univ Colombo, Dept Plant Sci, Fac Sci, Colombo 00300, Sri Lanka

25.Blaihofstr 42, D-72074 Tubingen, Germany

26.Vishnugupta Vishwavidyapeetam, Div Biol, Ashoke 581326, Gokarna, India

27.Goa Univ, Dept Bot, Taleigao Plateau 403206, Goa, India

28.West Pomeranian Univ Technol Szczecin, Dept Environm Management, Slowackiego 17, PL-71434 Szczecin, Poland

29.Yeasts Fdn, NL-1015 JR Amsterdam, Netherlands

30.Natl Sci & Technol Dev Agcy NSTDA, Natl Ctr Genet Engn & Biotechnol BIOTEC, 111 Thailand Sci Pk,Phahonyothin Rd, Khlong Luang 12120, Pathum Thani, Thailand

31.Heilbronn Univ Appl Sci, Lab Wine Microbiol, Dept Int Business, Heilbronn, Germany

32.Chinese Acad Sci, State Key Lab Mycol, Inst Microbiol, Beijing 100101, Peoples R China

33.Univ Quebec Abitibi Temiscamingue, Forest Res Inst, 445 Boul Univ, Rouyn Noranda, PQ J9X 5E4, Canada

34.Univ Quebec Montreal, Ctr Forest Res, Montreal, PQ H3C 3P8, Canada

35.Univ Tuscia, Dept Ecol & Biol Sci, I-01100 Viterbo, Italy

36.Catholic Univ Louvain, Mycol Lab, Earth & Life Inst, BCCM MUCL, B-1348 Louvain La Neuve, Belgium

37.Empresa Brasileira Pesquisa Agr, Nucleo Biol Aplicada, Embrapa Milho & Sorgo, BR-35702098 Sete Lagoas, MG, Brazil

38.Hakim Sabzevari Univ, Dept Biol, Sabzevar, Iran

39.Chandigarh Univ, Dept Biotechnol, Univ Ctr Res & Dev, Mohali 140413, Punjab, India

40.Gauhati Univ, Mol & Appl Mycol Lab, Dept Bot, Gauhati 781014, Assam, India

41.B Hood Mycotrop Innovat, 1-9,1st Lane, Matara, Sri Lanka

42.Western SydneyUniv, Hawkesbury Inst Environm, Penrith, NSW, Australia

43.Western Sydney Univ, Global Ctr Land Based Innovat, Penrith, NSW, Australia

44.Oklahoma State Univ, Dept Microbiol & Mol Genet, Stillwater, OK USA

45.Beijing Forestry Univ, State Key Lab Efficient Prod Forest Resources, Beijing 100083, Peoples R China

46.Beijing Forestry Univ, Minist Educ, Key Lab Silviculture & Conservat, Beijing 100083, Peoples R China

47.Murdoch Univ, Harry Butler Inst, Murdoch, WA 6150, Australia

48.Westerdijk Fungal Biodivers Inst, Uppsalalaan 8, NL-3584 CT Utrecht, Netherlands

49.Anhui Agr Univ, Anhui Prov Key Lab Microbial Pest Control, Hefei 230036, Peoples R China

50.Univ British Columbia, Dept Bot, Vancouver, BC V6T 1Z4, Canada

51.MH Kholodny Inst Bot, Tereshchenkivska Str 2, UA-01004 Kyiv, Ukraine

52.Lund Univ, Mol Cell Biol Unit, Solvegatan 35, S-22362 Lund, Sweden

53.Chiang Mai Univ, Fac Sci, Ctr Excellence Microbial Div & Sustainable Utiliz, Chiang Mai 50200, Thailand

54.Chiang Mai Univ, Off Res Adm, Chiang Mai 50200, Thailand

55.Univ Gdansk, Fac Biol, Dept Plant Taxon & Nat Conservat, Wita Stwosza 59, PL-80308 Gdansk, Poland

56.Guizhou Med Univ, State Key Lab Funct & Applicat Med Plants, Guiyang, Guizhou, Peoples R China

57.Guizhou Med Univ, High Efficacy Applicat Nat Med Resources Engn Ctr, Key Lab Optimal Utilizat Nat Med Resources, Sch Pharmaceut Sci, Guiyang, Guizhou, Peoples R China

58.Shandong Normal Univ, Coll Life Sci, Jinan 250014, Peoples R China

59.Field Museum, Collect Conservat & Res Div, 1400 S DuSable Lake Shore Dr, Chicago, IL 60605 USA

60.Univ Tarapaca, Dept Tecnol Med, Fac Ciencias Salud, Ave Luis Emilio Recabarren, Iquique 2477, Chile

61.Univ Silesia Katowice, Inst Biol Biotechnol & Environm Protect, Fac Nat Sci, Jagiellonska 28, PL-40032 Katowice, Poland

62.Natl Museum Nat Hist Luxembourg, 25 Rue Munster, L-2160 Grund, Luxembourg

63.Manaaki Whenua Landcare Res, Private Mail Bag 92170, Auckland, New Zealand

64.Swedish Univ Agr Sci, Dept Forest Mycol & Plant Pathol, Uppsala BioCtr, Box 7026, S-75007 Uppsala, Sweden

65.Rudjer Boskovic Inst, Lab Biol Divers, Bijenicka Cesta 54, Zagreb 10000, Croatia

66.RAS, Lab Cytol Unicellular Organisms, Inst Cytol, Tikhoretsky Ave 4, St Petersburg 194064, Russia

67.Anhui Univ Technol, Sch Civil Engn & Architecture, Maanshan 243002, Peoples R China

68.Univ Warsaw, Inst Evolutionary Biol, Fac Biol, Biol & Chem Res Ctr, Zwirki & Wigury 101, PL-02089 Warsaw, Poland

69.Univ Innsbruck, Dept Microbiol, Technikerstr 25, A-6020 Innsbruck, Austria

70.Russian Acad Sci, Inst Zool, Univ Skaya Emb 1, St Petersburg 198904, Russia

71.Natl Inst Fundamental Studies, Hantana Rd, Kandy, Sri Lanka

72.Chiang Mai Univ, Sustainable Dev Biol Resources Lab, Fac Sci, Chiang Mai 50200, Thailand

73.Chiang Mai Univ, Dept Biol, Fac Sci, Chiang Mai 50200, Thailand

74.MACS Agharkar Res Inst, Biodivers & Palaeobiol Fungi Gr, Natl Fungal Culture Collect India NFCCI, GG Agarkar Rd, Pune 411004, Maharashtra, India

75.Xinjiang Acad Agr Sci, Key Lab Integrated Pest Management Crops Northwes, Minist Agr & Rural Affairs, Inst Plant Protect, Urumqi 830091, Xinjiang, Peoples R China

76.Chiang Mai Univ, Dept Entomol & Plant Pathol, Fac Agr, Chiang Mai 50200, Thailand

77.Univ Fed Pernambuco, Dept Micol, Programa Posgrad Biol Fungos, Campus Univ, BR-50670901 Recife, PE, Brazil

78.Mozartstr 9, D-73117 Wangen Im Allgau, Germany

79.Italian Antarctic Natl Museum MNA, Mycol Sect, Genoa, Italy

80.Kirsehir Ahi Evran Univ, Dept Mol Biol & Genet, Fac Sci & Arts, TR-40169 Kirsehir, Turkiye

81.Purdue Univ, Dept Bot & Plant Pathol, W Lafayette, IN 47907 USA

82.Tomsk State Univ, Pr Lenina 36, Tomsk 634050, Russia

83.Hirosaki Univ, Fac Agr & Life Sci, 3 Bunkyo Cho, Hirosaki, Aomori 0368561, Japan

84.Ascomycete Org, 13 Chemin Bois Ponard, F-69160 Tassin La Demi Lune, France

85.Chinese Acad Sci, Honghe Ctr Mt Futures, Kunming Inst Bot, Kunming 654400, Yunnan, Peoples R China

86.Qingdao Agr Univ, Lab Aquat Parasitol & Microbial Resources, Sch Marine Sci & Engn, Qingdao 266109, Shandong, Peoples R China

87.Beijing Forestry Univ, Inst Microbiol, Sch Ecol & Nat Conservat, Beijing 100083, Peoples R China

88.Goethe Univ, Dept Biol Sci, Inst Ecol Evolut & Divers, Max vonLaueStr 13, D-60486 Frankfurt, Germany

89.Senckenberg Biodivers & Climate Res Ctr, Senckenberganlage 25, D-60325 Frankfurt, Germany

90.Univ Hamburg, Organism Bot & Mycol, Inst Plant Sci & Microbiol, Ohnhorststr 18, D-22609 Hamburg, Germany

91.Iwate Univ, United Grad Sch Agr Sci, 18-8 Ueda 3 Chome, Morioka, Iwate 0208550, Japan

关键词: Caulochytriomycota; Phylogenomic analyses; Pneumocystomycetidae; Sanchytriomycotina

期刊名称:FUNGAL DIVERSITY ( 影响因子:24.8; 五年影响因子:28.3 )

ISSN: 1560-2745

年卷期: 2024 年 128 卷 1 期

页码:

收录情况: SCI

摘要: Fungi are one of the most diverse groups of organisms with an estimated number of species in the range of 2-3 million. The higher-level ranking of fungi has been discussed in the framework of molecular phylogenetics since Hibbett et al., and the definition and the higher ranks (e.g., phyla) of the 'true fungi' have been revised in several subsequent publications. Rapid accumulation of novel genomic data and the advancements in phylogenetics now facilitate a robust and precise foundation for the higher-level classification within the kingdom. This study provides an updated classification of the kingdom Fungi, drawing upon a comprehensive phylogenomic analysis of Holomycota, with which we outline well-supported nodes of the fungal tree and explore more contentious groupings. We accept 19 phyla of Fungi, viz. Aphelidiomycota, Ascomycota, Basidiobolomycota, Basidiomycota, Blastocladiomycota, Calcarisporiellomycota, Chytridiomycota, Entomophthoromycota, Entorrhizomycota, Glomeromycota, Kickxellomycota, Monoblepharomycota, Mortierellomycota, Mucoromycota, Neocallimastigomycota, Olpidiomycota, Rozellomycota, Sanchytriomycota, and Zoopagomycota. In the phylogenies, Caulochytriomycota resides in Chytridiomycota; thus, the former is regarded as a synonym of the latter, while Caulochytriomycetes is viewed as a class in Chytridiomycota. We provide a description of each phylum followed by its classes. A new subphylum, Sanchytriomycotina Karpov is introduced as the only subphylum in Sanchytriomycota. The subclass Pneumocystomycetidae Kirk et al. in Pneumocystomycetes, Ascomycota is invalid and thus validated. Placements of fossil fungi in phyla and classes are also discussed, providing examples.

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