文献类型: 外文期刊
作者: Koens, Lianne 1 ; Qin, Yongjun 2 ; Leung, Wai Y. 2 ; Corver, Willem E. 1 ; Jansen, Patty M. 1 ; Willemze, Rein 2 ; Ver 1 ;
作者机构: 1.Leiden Univ, Dept Pathol, Med Ctr, Leiden, Netherlands
2.Leiden Univ, Med Ctr, Dept Dermatol, Leiden, Netherlands
3.Shanxi Acad Agr Sci, Ctr Biotechnol, Taiynan, Peoples R China
期刊名称:PLOS ONE ( 影响因子:3.24; 五年影响因子:3.788 )
ISSN: 1932-6203
年卷期: 2013 年 8 卷 12 期
页码:
收录情况: SCI
摘要: Aberrant expression of microRNAs is widely accepted to be pathogenetically involved in nodal diffuse large B-cell lymphomas (DLBCLs). However, the microRNAs profiles of primary cutaneous large B-cell lymphomas (PCLBCLs) are not yet described. Its two main subtypes, i.e., primary cutaneous diffuse large B-cell lymphoma, leg type (PCLBCL-LT) and primary cutaneous follicle center lymphoma (PCFCL) are characterized by an activated B-cell (ABC)-genotype and a germinal center B-cell (GCB)-genotype, respectively. We performed high-throughput sequencing analysis on frozen tumor biopsies from 19 cases of PCFCL and PCLBCL-LT to establish microRNA profiles. Cluster analysis of the complete microRNome could not distinguish between the two subtypes, but 16 single microRNAs were found to be differentially expressed. Single microRNA RT-qPCR was conducted on formalin-fixed paraffin-embedded tumor biopsies of 20 additional cases, confirming higher expression of miR-9-5p, miR-31-5p, miR-129-2-3p and miR-214-3p in PCFCL as compared to PCLBCL-LT. MicroRNAs previously described to be higher expressed in ABC-type as compared to GCB-type nodal DLBCL were not differentially expressed between PCFCL and PCLBCL-LT. In conclusion, PCFCL and PCLBCL-LT differ in their microRNA profiles. In contrast to their gene expression profile, they only show slight resemblance with the microRNA profiles found in GCB- and ABC-type nodal DLBCL.
- 相关文献
作者其他论文 更多>>
-
The Tartary Buckwheat Genome Provides Insights into Rutin Biosynthesis and Abiotic Stress Tolerance
作者:Zhang, Lijun;Ma, Mingchuan;Liu, Longlong;Zhou, Jianping;Nan, Chenghu;Qin, Yongjun;Cui, Lin;Liu, Huimin;Qiao, Zhijun;Zhang, Lijun;Han, Yuanhuai;Ma, Mingchuan;Liu, Longlong;Zhou, Jianping;Nan, Chenghu;Qin, Yongjun;Cui, Lin;Liu, Huimin;Qiao, Zhijun;Zhang, Lijun;Han, Yuanhuai;Ma, Mingchuan;Liu, Longlong;Zhou, Jianping;Nan, Chenghu;Qin, Yongjun;Cui, Lin;Liu, Huimin;Qiao, Zhijun;Li, Xiuxiu;Ma, Bin;Gao, Qiang;Du, Huilong;Li, Yan;Cao, Yinghao;Qi, Ming;Lu, Hongwei;Liang, Chengzhi;Li, Xiuxiu;Du, Huilong;Lu, Hongwei;Liang, Chengzhi;Han, Yuanhuai;Zhu, Yaxin;Wang, Jun
关键词:tartary buckwheat;de novo genome assembly;rutin biosynthesis;aluminum resistance;abiotic stress;whole genome duplication