Genome sequence of a dissimilatory Fe(III)-reducing bacterium Geobacter soli type strain GSS01(T)
文献类型： 外文期刊
作者： Yang, Guiqin 1 ; Chen, Shanshan 2 ; Zhou, Shungui 2 ; Liu, Yongfeng 4 ;
作者机构： 1.Chinese Acad Sci, Guangzhou Inst Geochem, Guangzhou 510640, Guangdong, Peoples R China
2.Guangdong Inst Ecoenvironm & Soil Sci, Guangdong Key Lab Agr Environm Pollut Integrated, Guangzhou 510650, Guangdong, Peoples R China
3.Univ Chinese Acad Sci, Beijing 100049, Peoples R China
4.BGI Shenzhen, Shenzhen 518083, Peoples R China
关键词： Geobacter soli;Extracellular electron transfer;Insoluble Fe(III) oxides reduction;Cytochrome;Pilin protein
期刊名称：STANDARDS IN GENOMIC SCIENCES （ 影响因子：1.339； 五年影响因子：1.656 ）
ISSN： 1944-3277
年卷期： 2015 年 10 卷
页码：
收录情况： SCI
摘要： Strain GSS01(T) (=KCTC 4545=MCCC 1 K00269) is the type strain of the species Geobacter soli. G. soli strain GSS01T is of interest due to its ability to reduce insoluble Fe(III) oxides with a wide range of electron donors. Here we describe some key features of this strain, together with the whole genome sequence and annotation. The genome of size 3,657,100 bp contains 3229 protein-coding and 54 RNA genes, including 2 16S rRNA genes. The genome of strain GSS01(T) contains 76 predicted cytochrome genes, 24 pilus assembly protein genes and several other genes, which were proposed to be related to the reduction of insoluble Fe(III) oxides. The genes associated with the electron donors and acceptors of strain GSS01T were predicted in the genome. Information gained from its sequence will be relevant to the future elucidation of extracellular electron transfer mechanism during the reduction of Fe(III) oxides.
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