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Evaluation of four protein extraction methods for proteomic analysis of mango peel

文献类型: 外文期刊

作者: Liao, D. J. 1 ; Lu, X. P. 1 ; Chen, H. S. 1 ; Lu, Y. 2 ; Mo, Z. Y. 1 ;

作者机构: 1.Guangzhou Med Univ, Affiliated Hosp 1, Guangzhou Inst Resp Dis, State Key Lab Resp Dis, Guangzhou, Guangdong, Peoples R China

2.Chinese Acad Trop Agr Sci, Environm & Plant Protect Inst, Danzhou, Peoples R China

关键词: Mango peel;Protein extraction;2-DE;Proteomic analysis;Evaluation

期刊名称:GENETICS AND MOLECULAR RESEARCH ( 影响因子:0.764; 五年影响因子:0.912 )

ISSN: 1676-5680

年卷期: 2016 年 15 卷 3 期

页码:

收录情况: SCI

摘要: The peel of mango (Mangifera indica L.) is a special plant tissue that contains many compounds that interfere with protein extraction. A successful separation with Two-dimensional electrophoresis (2-DE) is the key step for proteomic analysis. To evaluate the efficiencies of mango peel protein extraction for 2-DE, four extraction methods were tested: 1) 2-D clean-up kit, 2) trichloroacetic acid/acetone precipitation, 3) phenol extraction, 4) phenol with methanol/ammonium acetate precipitation. The results showed that the phenol with methanol/ammonium acetate precipitation produced the best quality protein extraction and separation. Proteins were separated in 30-70 and > 70 kDa ranges better than with the other methods. Acidic proteins had better resolution with fewer horizontal and vertical streaks. Sixteen proteins were identified by maxtrix-assisted laser desorption/ionisation time-of-flight tandem mass spectrometry (MALDI-TOF/TOF-MS/MS). The result demonstrated that each of these four methods can be used to prepare mango peel proteins. The phenol with methanol/ammonium acetate precipitation was the best choice for proteomic analysis of mango peel.

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