Abundance and Community Composition of Ammonia-Oxidizers in Paddy Soil at Different Nitrogen Fertilizer Rates
文献类型: 外文期刊
作者: Song Ya-na 1 ; Lin Zhi-min 1 ;
作者机构: 1.Fujian Acad Agr Sci, Inst Biol Technol, Fuzhou 350003, Peoples R China
关键词: ammonia-oxidizing bacteria;ammonia-oxidizing archaea;nitrogen fertilizer rates;paddy soil
期刊名称:JOURNAL OF INTEGRATIVE AGRICULTURE ( 影响因子:2.848; 五年影响因子:2.979 )
ISSN: 2095-3119
年卷期: 2014 年 13 卷 4 期
页码:
收录情况: SCI
摘要: Ammonia oxidation, the first and rate-limiting step of nitrification, is carried out by both ammonia-oxidizing bacteria (AOB) and ammonia-oxidizing archaea (AOA). However, the relative importance of AOB and AOA to nitrification in terrestrial ecosystems is not well understood. The aim of this study was to investigate the effect of the nitrogen input amount on abundance and community composition of AOB and AOA in red paddy soil. Soil samples of 10-20 cm (root layer soil) and 0-5 cm (surface soil) depths were taken from a red paddy. Rice in the paddy was fertilized with different rates of N as urea of N1 (75 kg N ha(-1) yr(-1)), N2 (150 kg N ha(-1) yr(-1)), N3 (225 kg N ha(-1) yr(-1)) and CK (without fertilizers) in 2009, 2010 and 2011. Abundance and community composition of ammonia oxidizers was analyzed by real-time PCR and denaturing gradient gel electrophoresis (DGGE) based on arnoA (the unit A of ammonia monooxygenase) gene. Archaeal amoA copies in N3 and N2 were significantly (P<0.05) higher than those in CK and N1 in root layer soil or in surface soil under tillering and heading stages of rice, while the enhancement in bacterial amoA gene copies with increasing of N fertilizer rates only took on in root layer soil. N availability and soil NO3--N content increased but soil NH4+-N content didn't change with increasing of N fertilizer rates. Otherwise, the copy numbers of archaeal amoA gene were higher (P<0.05) than those of bacterial amoA gene in root lary soil or in surface soil. Redundancy discriminate analysis based on DGGE bands showed that there were no obvious differs in composition of AOA or AOB communities in the field among different N fertilizer rates. Results of this study suggested that the abundance of ammonia-oxidizers had active response to N fertilizer rates and the response of AOA was more obvious than that of AOB. Similarity in the community composition of AOA or AOB among different N fertilizer rates indicate that the community composition of ammonia-oxidizers was relatively stable in the paddy soil at least in short term for three years.
- 相关文献
作者其他论文 更多>>
-
Changes in bacterial community and abundance of functional genes in paddy soil with cry1Ab transgenic rice
作者:Song Ya-na;Chen Zai-jie;Wu Ming-ji;Li Gang;Wang Feng
关键词:cry1Ab transgenic rice; bacterial community; microbial functional gene; Illumina MiSeq Platform; real-time PCR
-
Diversity of Microbial Community in a Paddy Soil with cry1Ac/cpti Transgenic Rice
作者:Song Ya-Na;Su Jun;Chen Rui;Lin Yan;Wang Feng
关键词:bacterial community;denaturing gradient gel electrophoresis;fungal community;genetically modified plants;real-time polymerase chain reaction