Time-course dual RNA-seq analyses and gene identification during early stages of plant-Phytophthora infestans interactions
文献类型: 外文期刊
作者: Cai, Yanling 1 ; Wang, Zhiqing 1 ; Wan, Wei 1 ; Qi, Jinfeng 3 ; Liu, Xiao-Feng 1 ; Wang, Yantao 1 ; Lyu, Yaqing 1 ; Li, Tao 4 ; Dong, Suomeng 5 ; Huang, Sanwen 1 ; Zhou, Shaoqun 1 ;
作者机构: 1.Chinese Acad Agr Sci, Minist Agr & Rural Affairs, Key Lab Synthet Biol, Shenzhen Branch,Guangdong Lab Lingnan Modern Agr,A, Shenzhen 518120, Guangdong, Peoples R China
2.Southwest Univ, Inst Sericulture & Syst Biol, State Key Lab Resource Insects, Chongqing 400715, Peoples R China
3.Chinese Acad Sci, Kunming Inst Bot, Yunnan Key Lab Wild Plant Resources, Dept Econ Plants & Biotechnol, Kunming 650201, Peoples R China
4.Guangdong Acad Agr Sci, Vegetable Res Inst, Guangdong Key Lab New Technol Res Vegetables, Guangzhou 510640, Peoples R China
5.Nanjing Agr Univ, Minist Agr & Rural Affairs, Key Lab Soybean Dis & Pest Control, Dept Plant Pathol, Nanjing 210095, Jiangsu, Peoples R China
6.Univ Macau, Fac Hlth Sci, Macau, Peoples R China
期刊名称:PLANT PHYSIOLOGY ( 影响因子:6.9; 五年影响因子:7.7 )
ISSN: 0032-0889
年卷期: 2025 年 197 卷 4 期
页码:
收录情况: SCI
摘要: Late blight caused by Phytophthora infestans is a major threat to global potato and tomato production. Sustainable management of late blight requires the development of resistant crop cultivars. This process can be facilitated by high-throughput identification of functional genes involved in late blight pathogenesis. In this study, we generated a high-quality transcriptomic time-course dataset focusing on the initial 24 h of contact between P. infestans and 3 solanaceous plant species, tobacco (Nicotiana benthamiana), tomato (Solanum lycopersicum), and potato (Solanum tuberosum). Our results demonstrate species-specific transcriptional regulation in early stages of the infection. Transient silencing of putative RIBOSE-5-PHOSPHATE ISOMERASE and HMG-CoA REDUCTASE genes in N. benthamiana lowered plant resistance against P. infestans. Furthermore, heterologous expression of a putative tomato Golgi-localized nucleosugar transporter-encoding gene exacerbated P. infestans infection of N. benthamiana. In comparison, bioassays using transgenic tomato lines showed that the quantitative disease resistance genes were required but insufficient for late blight resistance; genetic knock-out of the susceptibility gene enhanced resistance. The same RNA-seq dataset was exploited to examine the transcriptional landscape of P. infestans and revealed host-specific gene expression patterns in the pathogen. This temporal transcriptomic diversity, in combination with genomic distribution features, identified the P. infestans IPI-B family GLYCINE-RICH PROTEINs as putative virulence factors that promoted disease severity or induced plant tissue necrosis when transiently expressed in N. benthamiana. These functional genes underline the effectiveness of functional gene-mining through a time-course dual RNA-seq approach and provide insight into the molecular interactions between solanaceous plants and P. infestans. A time-course dual RNA-sequencing analysis of the early stages of interactions between Phytophthora infestans and 3 solanaceous species reveals host resistance and pathogen virulence genes.
- 相关文献
作者其他论文 更多>>
-
Genome-Wide Identification and Expression Analysis of the SPL Gene Family in Solanum melongena (Eggplant)
作者:Cheng, Hefen;Zhou, Dinggang;Cheng, Hefen;Li, Zhiliang;Sun, Baojuan;Zhao, Wei;Zhang, Songyuan;Li, Tao;You, Qian
关键词:eggplant;
SmSPL ; genome; fruit development; expression patterns -
Drying methods affect nutritional value, amino acids, bioactive compounds, and in vitro function of extract in mulberry leaves
作者:Zhao, Chengfeng;Li, Tao;Zhang, Cangning;Li, Haonan;Wang, Yuhua;Li, Chengmin;Shen, Manman;Zhao, Weiguo;Zhao, Chengfeng;Li, Tao;Zhang, Cangning;Li, Haonan;Wang, Yuhua;Li, Chengmin;Shen, Manman;Zhao, Weiguo;Wang, Zhenjiang;Zhao, Mengdi
关键词:Mulberry leaf; Processing method; Nutritional composition; Bioactive compounds; Antioxidant activity; Bioactivity
-
Genetic Editing of Tomato Golgi-Localized Nucleotide Sugar Transporter 1.1 Promotes Immunity Against Phytophthora infestans
作者:He, Peize;Zhang, Xingtan;He, Peize;Cai, Yanling;Wang, Yanzi;Wang, Zhiqing;Lyu, Yaqing;Zhang, Xingtan;Zhou, Shaoqun;Wang, Yanzi;Wang, Yanzi;Li, Tao
关键词:late blight; Golgi-localized nucleotide sugar transporter; susceptibility gene;
Solanum lycopersicum ;Phytophthora infestans -
A QTL of eggplant shapes the rhizosphere bacterial community, co-responsible for resistance to bacterial wilt
作者:Gong, Chao;Li, Zhiliang;Sun, Baojuan;Luo, Wenlong;Luo, Shanwei;Chen, Shuting;Mai, Peiting;Li, Zhenxing;Li, Tao;Wang, Zhenshuo;Li, Ye;Wang, Yikui
关键词:
-
Genetic diversity and population structure analysis of 418 tomato cultivars based on single nucleotide polymorphism markers
作者:Xu, Weijie;Gong, Chao;Mai, Peiting;Li, Zhenxing;Sun, Baojuan;Li, Tao
关键词:genetic relationship; population structure; SNPs; DNA fingerprint; SNP markers
-
Characterization of odor-contributing volatile in Capsicum chinense 'JT-1'fruits during development and transcriptome analysis of key fruit-aroma formation periods
作者:Heng, Zhou;Xu, Xiaowan;Xu, Xiaomei;Wang, Hengming;Li, Zhenxing;Li, Zhiliang;You, Qian;Sun, Baojuan;Gong, Chao;Yin, Yan;Li, Ying;Li, Tao;Liu, Lei;Li, Ying;Li, Tao
关键词:Chili pepper; GC-O-MS; Volatile organic compounds; Transcriptome
-
Genome-Wide Analysis Revealed NBS-LRR Gene Candidates Associated with Bacterial Wilt Resistance in Eggplant (Solanum melongena L.)
作者:Jiang, Yaolan;Cheng, Hefen;Zhou, Dinggang;Jiang, Yaolan;Li, Zhiliang;Cheng, Hefen;Zhao, Wei;Li, Tao;Sun, Baojuan;You, Qian;Li, Wenxiang
关键词:eggplant; NBS-LRR; disease resistance; genome-wide investigation; bacterial wilt resistance



