The complete chloroplast genome of Castanea seguinii, an endemic to China
文献类型: 外文期刊
第一作者: Chen, Xin
作者: Chen, Xin;Liu, Qingzhong;Xu, Li;Zhang, Lisi;Guo, Wei
作者机构:
关键词: Castanea seguinii; chloroplast genome; Illumina sequencing
期刊名称:MITOCHONDRIAL DNA PART B-RESOURCES ( 影响因子:0.658; 五年影响因子:0.674 )
ISSN: 2380-2359
年卷期: 2019 年 4 卷 1 期
页码:
收录情况: SCI
摘要: Castanea seguinii is an endemic chestnut species in China, which is widely distributed over central and southeastern China. The chloroplast genome sequences were finally resolved by high-throughput sequencing platform Illumina Hiseq X Ten. Totally the genome is 160,419 by in size, AT rich (63.3%), comprising a couple of 25,694 bp long inverted repeat regions, separated by a 90,055 bp large and 18,976 by small single copy regions. 79 protein-coding genes, four ribosomal RNA genes and 30 transfer RNA genes were identified and annotated. The results of the molecular phylogenetic analysis exhibited that C. seguinii showed the closest relationship with C. mollissima, with high bootstrap support.
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