1A and 3D gene sequences of coxsackievirus B3 strain CC: Variation and phylogenetic analysis

文献类型： 外文期刊

第一作者： Wu, Dong-Lai

作者： Wu, Dong-Lai;Liu, Ni-Hong;Meng, Qing-Wen;Liu, Ming-Yu;Meng, Fan-Chao

作者机构：

关键词： coxsackievirus B3;strain CC;1A;3D;variation;phylogenetic analysis;INFECTIOUS CDNA COPY;HUMAN-ENTEROVIRUS-B;FREQUENT RECOMBINATION;GENOME;VIRUSES;REGION;VP1

期刊名称：DNA SEQUENCE （ 影响因子：0.408； 五年影响因子：0.594 ）

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年卷期：

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收录情况： SCI

摘要： Coxsackievirus B3 (CVB3) was thought to be the most common causative agent of life-threatening viral myocarditis. Coxsackievirus B3 strain CC (CVB3-CC) was isolated in China; however, no sequence data are available. The 1A and 3D regions of CVB3-CC were sequenced and phylogenetic analysis was done with reference to ten other CVB3 strains and all 36 prototype strains of human enterovirus B (HEV-B). Sequence analysis showed that the 1A gene region of CVB3-CC consisted of 207 nucleotides, encoding 69 amino acids; and the 3D gene region was comprised of 1386 nucleotides, encoding 462 amino acids. Variation analysis showed that the 3D gene of CVB3 strain CC varied the least among the two regions. Phylogenetic tree analysis of the 1A and 3D regions indicated that CVB3-CC clustered together with CVB3 Nancy strain suggesting that there may be a close evolutionary relationship between the two strains. Incongruity was observed between the non-structural protein gene and the structural protein gene trees, according to the topological structure, indicating that recombination was occurred among these strains.

分类号： Q5

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