Genome-wide analysis of the SCPL gene family in grape (Vitis vinifera L.)

文献类型： 外文期刊

第一作者： Wang Xi-cheng

作者： Wang Xi-cheng;Wu Wei-min;Zhou Bei-bei;Wang Zhuang-wei;Qian Ya-ming;Wang Bo;Yan Li-chun

作者机构：

关键词： serine carboxypeptidase-like (SCPL) protein; grape; phylogenetic relationships; abiotic stress; gene expression

期刊名称：JOURNAL OF INTEGRATIVE AGRICULTURE （ 影响因子：2.848； 五年影响因子：2.979 ）

ISSN： 2095-3119

年卷期： 2021 年 20 卷 10 期

页码：

收录情况： SCI

摘要： Serine carboxypeptidase-like (SCPL) proteins are a group of acyltransferase enzymes that have important roles in plant growth, development, and stress responses. Although SCPL proteins have been studied in many plants, the biological functions of SCPL genes in grape are still unknown. In this study, 59 putative SCPL proteins were identified from the grape genome. A bioinformatics analysis, including chromosomal locations, exon/intron structures, phylogeny, ciselements, and conserved motifs, was performed for the gene family. The phylogenetic analysis revealed that VvSCPL proteins could be classified into three groups, with the gene motifs in each group showing high similarity levels. The number of exons in the VvSCPL genes ranged from 1 to 19, suggesting significant variations among grape SCPL genes. The expression of the VvSCPL genes, as assessed by RNA sequencing (RNA-seq) and quantitative real-time PCR, showed that most VvSCPL genes responded to drought- and waterlogging-stress treatments, which indicated their roles in abiotic stress responses. The results provide useful information for further study of SCPL genes in grape.

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