Using the Intrinsic Fluorescence of DNA to Characterize Aptamer Binding

文献类型: 外文期刊

第一作者: Lu, Chang

作者: Lu, Chang;Zheng, Jinkai;Lu, Chang;Lopez, Anand;Liu, Juewen

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关键词: intrinsic fluorescence; DNA; aptamer; binding

期刊名称:MOLECULES ( 影响因子:4.927; 五年影响因子:5.11 )

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年卷期: 2022 年 27 卷 22 期

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收录情况: SCI

摘要: The reliable, readily accessible and label-free measurement of aptamer binding remains a challenge in the field. Recent reports have shown large changes in the intrinsic fluorescence of DNA upon the formation of G-quadruplex and i-motif structures. In this work, we examined whether DNA intrinsic fluorescence can be used for studying aptamer binding. First, DNA hybridization resulted in a drop in the fluorescence, which was observed for A30/T30 and a 24-mer random DNA sequence. Next, a series of DNA aptamers were studied. Cortisol and Hg2+ induced fluorescence increases for their respective aptamers. For the cortisol aptamer, the length of the terminal stem needs to be short to produce a fluorescence change. However, caffeine and adenosine failed to produce a fluorescence change, regardless of the stem length. Overall, using the intrinsic fluorescence of DNA may be a reliable and accessible method to study a limited number of aptamers that can produce fluorescence changes.

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