Environmental effects on mineral accumulation in rice grains and identification of ecological specific QTLs

文献类型： 外文期刊

第一作者： Du, Juan

作者： Du, Juan;Wang, Biao;Zheng, Shusong;Ling, Hong-Qing;Zeng, Dali;Qian, Qian

作者机构：

关键词： rice;double-haploid population;mineral accumulation;quantitative trait locus (QTL )

期刊名称：ENVIRONMENTAL GEOCHEMISTRY AND HEALTH （ 影响因子：4.609； 五年影响因子：4.677 ）

ISSN：

年卷期：

页码：

收录情况： SCI

摘要： Optimizing the beneficial mineral elements in rice grains is of interest for rice breeders. To study the environmental effects on mineral accumulation in rice grains, we grew a double-haploid (DH) population derived from the cross between cultivars Chunjiang 06 (CJ06, a japonica rice) and TNI (an indica rice) under two different ecological environments (Lingshui and Hangzhou, China) and determined the content of Ca, Fe, K, Mg, Mn, P, and Zn in brown rice. These contents show transgressive variation among the DH lines. Subsequently, the quantitative trait loci (QTLs) for mineral accumulation in rice grain were mapped on the chromosomes using CJ06/TN1 population. For the 7 mineral elements investigated, 23 and 9 QTLs were identified for Lingshui and Hangzhou, respectively. Of these, 24 QTLs were reported for the first time in this study and 8 QTLs are consistent with previous reports. Only 2 QTLs for Mg accumulation have been detected in both environments, indicating that mineral accumulation QTLs in rice grains are largely environment dependent. Additionally, co-localizations of QTLs for Mn and Zn, Mg and P, and Mg and Mn accumulation have been observed, implying that these loci might be involved in the accumulation of different elements. Furthermore, the QTLs for the accumulation of Fe, K, Mg, Mn, P, and Zn were mapped to a region close to each other on chromosomes 8 and 9, suggesting that clusters of genes exist on chromosomes 8 and 9. Further characterization of these QTLs will provide a better understanding of the molecular mechanism responsible for mineral accumulation in rice grains.

分类号： X

  • 相关文献

[1]Association Mapping of Quantitative Trait Loci for Mineral Element Contents in Whole Grain Rice (Oryza sativa L.). Huang, Yan,Chen, Yaling,Tong, Chuan,Bao, Jinsong,Sun, Chengxiao,Min, Jie.

[2]Phytochrome B Negatively Affects Cold Tolerance by Regulating OsDREB1 Gene Expression through Phytochrome Interacting Factor-Like Protein OsPIL16 in Rice. He, Yanan,Li, Yaping,Cui, Lixin,Xie, Lixia,Zheng, Chongke,Zhou, Guanhua,Zhou, Jinjun,Xie, Xianzhi,Li, Yaping,Cui, Lixin. 2016

[3]A Kelch Motif-Containing Serine/Threonine Protein Phosphatase Determines the Large Grain QTL Trait in Rice. Hu, Zejun,Sun, Fan,Xin, Xiaoyun,Qian, Xi,Yang, Jingshui,Luo, Xiaojin,Hu, Zejun,He, Haohua,Wang, Wenxiang,Zhang, Shiyong. 2012

[4]Genome-wide identification of microRNAs and their targets in wild type and phyB mutant provides a key link between microRNAs and the phyB-mediated light signaling pathway in rice. Sun, Wei,wu, Xiu,Xie, Xianzhi,Xu, Xiao Hui,Lu, Xingbo,Sun, Hongwei,Wang, Yong. 2015

[5]Overexpression of an S-like ribonuclease gene, OsRNS4, confers enhanced tolerance to high salinity and hyposensitivity to phytochrome-mediated light signals in rice. Zheng, Jun,Wang, Yingying,He, Yanan,Zhou, Jinjun,Li, Yaping,Liu, Qianqian,Xie, Xianzhi,Zheng, Jun,Wang, Yingying,He, Yanan,Zhou, Jinjun,Xie, Xianzhi. 2014

[6]Distribution Characteristics of Soil Cadmium in Different Textured Paddy Soil Profiles and Its Relevance with Cadmium Uptake by Crops. Wang Zheng-yin,Qin Yu-sheng,Zhan Shao-jun,Yu Hua,Tu Shi-hua. 2013

[7]Overexpression of OsPIL15, a phytochromeinteracting factor- like protein gene, represses etiolated seedling growth in rice. Zhou, Jinjun,Liu, Qianqian,Wang, Yingying,Zhang, Shiyong,Cheng, Huimin,Yan, Lihua,Li, Li,Xie, Xianzhi,Zhou, Jinjun,Wang, Yingying,Zhang, Shiyong,Xie, Xianzhi,Liu, Qianqian,Xie, Xianzhi,Zhang, Fang,Chen, Fan. 2014

[8]DISTRIBUTION CHARACTERISTICS, BIOACCUMULATION, AND SOURCES OF MERCURY IN RICE AT NANSI LAKE AREA, SHANDONG PROVINCE, CHNIA. Liu, H.,Zhang, J.,Dai, J. L.,Wang, L. H.,Zhang, J.,Li, G. X.. 2015

[9]Nitrogen Status Diagnosis of Rice by Using a Digital Camera. Fan Ming-sheng,Zhang Fu-suo,Chen Xin-ping,Jia Liang-liang,Sun Yan-ming,Lue Shi-hua. 2009

[10]Influence of unflooded mulching cultivation on nitrogen uptake and utilization of fertilizer nitrogen by rice. Liu, Xuejun,Zhang, Fusuo,Mao, Daru,Zeng, Xingzhong,Lu, Shihua,Wang, Mingtian. 2008

[11]Overexpression of a phytochrome-regulated tandem zinc finger protein gene, OsTZF1, confers hypersensitivity to ABA and hyposensitivity to red light and far-red light in rice seedlings. Zhou, Jinjun,Fan, Zhongxue,Xie, Xianzhi,Zhang, Cheng,Zhou, Jinjun,Fan, Zhongxue,Xie, Xianzhi,Zhang, Cheng,Ma, Huiquan,Zhang, Fang,Chen, Fan. 2012

[12]Enhancement of innate immune system in monocot rice by transferring the dicotyledonous elongation factor Tu receptor EFR. Lu, Fen,Wang, Huiqin,Wang, Shanzhi,Jiang, Wendi,Yang, Jun,Sun, Wenxian,Lu, Fen,Wang, Huiqin,Wang, Shanzhi,Jiang, Wendi,Yang, Jun,Sun, Wenxian,Shan, Changlin,Li, Bin,Shan, Changlin,Li, Bin,Yang, Jun,Zhang, Shiyong. 2015

[13]A missense mutation in the transmembrane domain of CESA9 affects cell wall biosynthesis and plant growth in rice. Wang, Daofeng,Lan, Jinhao,Wang, Daofeng,Zhao, Jinfeng,Li, Xueyong,Yuan, Shoujiang,Yin, Liang,Guo, Baotai. 2012

[14]Mutations in the MIT3 gene encoding a caroteniod isomerase lead to increased tiller number in rice. Liu, Lihua,Peng, Peng,Qiu, Haiyang,Zhao, Jinfeng,Fang, Jingjing,Patil, Suyash Bhimgonda,Li, Xueyong,Xie, Tingting,Zhang, Wenhui,Wang, Yiqin,Fang, Shuang,Chu, Jinfang,Yuan, Shoujiang. 2018

[15]Detection of epistatic interactions of three QTLs for heading date in rice using single segment substitution lines. Ding, Han-Feng,Liu, Xu,Li, Run-Fang,Wang, Wen-Ying,Zhang, Y.,Zhang, Xiao-Dong,Yao, Fang-Yin,Li, Guang-Xian,Jiang, Ming-Song,Ding, Han-Feng.

[16]Delimitation of the PSH1(t) gene for rice purple leaf sheath to a 23.5 kb DNA fragment. Wang, Wen-Ying,Ding, Han-Feng,Li, Run-Fang,Liu, Xu,Zhang, Yu,Yao, Fang-Yin,Li, Guang-Xian,Jiang, Ming-Song.

[17]Determination of 5-hydroxymethyl-2-deoxycytidine in Rice by High-performance Liquid Chromatography-Tandem Mass Spectrometry with Isotope Dilution. Wang, Xiaoli,Wang, Shanshan,Chen, Xiangfeng,Chen, Yue,Yuan, Jinpeng,Zhao, Rusong,Guo, Tao. 2017

[18]Functional Marker Development and Effect Analysis of Grain Size Gene GW2 in Extreme Grain Size Germplasm in Rice. Zhang Ya-dong,Zheng Jia,Liang Yan-li,Zhao Chun-fang,Chen Tao,Zhao Qing-yong,Zhu Zhen,Zhou Li-hui,Yao Shu,Zhao Ling,Yu Xing,Wang Cai-lin. 2015

[19]Synonymous codon usage and gene function are strongly related in Oryza sativa. Liu, QP,Dou, SJ,Ji, ZJ,Xue, QZ. 2005

[20]Correlation between appearance of embryogenic cells and the IAA levels in rice somatic cell culture. Chen, YF,Zhou, X,Tang, RS,Zhang, JY,Mei, CS. 1998

作者其他论文 更多>>
  • Wild rice: unlocking the future of rice breeding

    作者：Zheng, Xiaoming;Qian, Qian;Zheng, Xiaoming;Qian, Qian;Zheng, Xiaoming;Peng, Youlin;Qiao, Jiyue;Qian, Qian;Henry, Robert

    关键词：wild rice; germplasm resources; rice breeding; cultivated rice

  • A centromere map based on super pan-genome highlights the structure and function of rice centromeres

    作者：Lv, Yang;Wang, Yueying;Jahan, Noushin;Ma, Jie;Qian, Qian;Guo, Longbiao;Lv, Yang;Liu, Congcong;Li, Xiaoxia;He, Huiying;He, Wenchuang;Chen, Wu;Yang, Longbo;Dai, Xiaofan;Cao, Xinglan;Yu, Xiaoman;Liu, Jiajia;Zhang, Bin;Wei, Hua;Zhang, Hong;Qian, Hongge;Shi, Chuanlin;Leng, Yue;Liu, Xiangpei;Guo, Mingliang;Wang, Xianmeng;Zhang, Zhipeng;Wang, Tianyi;Zhang, Bintao;Xu, Qiang;Cui, Yan;Zhang, Qianqian;Yuan, Qiaoling;Zhou, Yongfeng;Qian, Qian;Shang, Lianguang;Zheng, Xiaoming;Qian, Qian;Shang, Lianguang;Zheng, Xiaoming

    关键词：centromere; super pan-genome; CentO satellite repeat; rice

  • Identification and genetic diversity analysis of broomrape in Xinjiang, China

    作者：Zhang, Xuekun;Du, Juan;Wang, Panpan;Liu, Zheng;Yao, Zhaoqun;Zhao, Sifeng;Xi, Hui;Wang, Peng

    关键词：Broomrape; Phylogenetic analysis; Genetic diversity; ISSR

  • Uncovering key salt-tolerant regulators through a combined eQTL and GWAS analysis using the super pan-genome in rice

    作者：Wei, Hua;Wang, Xianmeng;Zhang, Zhipeng;Yang, Longbo;Zhang, Qianqian;Li, Yilin;He, Huiying;Chen, Dandan;Zhang, Bin;Leng, Yue;Cao, Xinglan;Cui, Yan;Shi, Chuanlin;Liu, Yifan;Lv, Yang;Ma, Jie;He, Wenchuang;Liu, Xiangpei;Xu, Qiang;Yuan, Qiaoling;Yu, Xiaoman;Wang, Tianyi;Qian, Hongge;Li, Xiaoxia;Zhang, Bintao;Zhang, Hong;Chen, Wu;Guo, Mingliang;Dai, Xiaofan;Qian, Qian;Shang, Lianguang;Zheng, Chongke;Xie, Xianzhi;Lv, Yang;Ma, Jie;Wang, Yuexing;Guo, Longbiao;Qian, Qian;Zheng, Xiaoming;Qian, Qian;Shang, Lianguang

    关键词：super pan-genome; expression quantitative trait loci; GWAS; salt tolerance; rice

  • Selenium Treatment Alleviates the Inhibition Caused by Nep-L Gene Knockdown in Silkworm (Bombyx mori)

    作者：Hong, Ting-Ting;Hu, Fei;Ge, Wen-Jie;Zhang, Rui;Thakur, Kiran;Wei, Zhao-Jun;Hu, Fei;Du, Juan;Thakur, Kiran;Wei, Zhao-Jun;Tang, Shun-Ming;Tang, Shun-Ming

    关键词：Bombyx mori; RNAi; Neutral endopeptidase (Nep); Selenium, Expression

  • Rice AGL1 determines grain size and sterile lemma identity

    作者：Yu, Haiping;Wang, An;Zhang, Guangheng;Dong, Guojun;Guo, Longbiao;Qian, Qian;Ren, Deyong;Zhang, Guangheng;Qian, Qian;Ren, Deyong;Zhang, Guangheng;Qian, Qian;Ren, Deyong

    关键词：Abnormal grain and sterile lemma 1; Oryza sativa; Grain size; Rudimentary glume

  • Fire effects on soil CH4 and N2O fluxes across terrestrial ecosystems

    作者：Guo, Jiahuan;Feng, Huili;Peng, Changhui;Kneeshaw, Daniel;Roberge, Gabrielle;Peng, Changhui;Du, Juan;Wang, Weifeng;Pan, Chang;Feng, Lei;Chen, Anping;Chen, Anping

    关键词：Fire; Soil; Methane; Nitrous oxide; Climate change; Terrestrial ecosystems

微信小程序