High polymorphism and moderate differentiation of chub mackerel, Scomber japonicus (Perciformes: Scombridae), along the coast of China revealed by fifteen novel microsatellite markers

文献类型： 外文期刊

第一作者： Cheng, Qiqun

作者： Cheng, Qiqun;Zhu, Yuxia;Chen, Xiaoyong

作者机构：

关键词： Scomber japonicus;Chub mackerel;Microsatellite;Genetic diversity;Population structure;Migration pattern

期刊名称：CONSERVATION GENETICS （ 影响因子：2.538； 五年影响因子：2.32 ）

ISSN：

年卷期：

页码：

收录情况： SCI

摘要： Genetic diversity and population structure of Scomber japonicus along the coast of China (from Yellow Sea-YS to East China Sea-ECS and South China Sea-SCS) were analysed in 319 individuals from 11 sites using 15 novel microsatellite loci. Relatively high levels of genetic variation within population (Na = 10.20-13.20, Ho = 0.507-0.686, He = 0.678-0.805, and PIC = 0.669-0.776) and moderate level of genetic differentiation among populations (F_(ST) = 0.1055) were detected. UPGMA, PCA and Bayesian analyses suggested that S. japonicus from YS to SCS can be divided into three major groups: one including all populations from YS extending to the eastern and western coast of Hainan Island in SCS, the second consisting of one population off the southern coast of Hainan Island in central SCS, and the third comprising one population in middle ECS. Furthermore, we inferred that there was at least one spawning stock of S. japonicus in YS, and the larvae/juveniles of S. japonicus tended to migrate from YS southward to SCS. Wilcoxon signed-rank test and mode-shift indicator of allele frequency distribution support that S. japonicus had not undergone recent genetic bottlenecks. This study revealed the population genetic diversity and structure of S. japonicus, and will be useful to the sustainable utilization, effective management and conservation of S. japonicus resource in the future.

分类号： Q3

  • 相关文献

[1]Microsatellite analysis reveals the population structure and migration patterns of Scomber japonicus (Scombridae) with continuous distribution in the East and South China Seas. Zeng, Liyan,Cheng, Qiqun,Chen, Xiaoyong.

[2]Genetic structure of Scomber japonicus (Perciformes: Scombridae) along the coast of China revealed by complete mitochondrial cytochrome b sequences. Zhu, Yuxia,Cheng, Qiqun,Rogers, Sean M..

[3]Genetic variation and population structure of the oriental fruit moth Grapholita molesta in Shanxi, a major pome fruits growing region in North China. Yang, Jing,Liu, Zhong-Fang,Fan, Ji-Qiao,Fan, Ren-Jun,Yang, Jing,Liu, Zhong-Fang,Fan, Ji-Qiao,Fan, Ren-Jun,Wu, Yu-Peng,Ma, Rui-Yan. 2016

[4]Genetic diversity and differentiation of Ankole cattle populations in Uganda inferred from microsatellite data. Kugonza, D. R.,Mpairwe, D.,Kiwuwa, G. H.,Kugonza, D. R.,Jianlin, H.,Okeyo, A. M.,Hanotte, O.,Jianlin, H.,Nabasirye, M..

[5]Evaluation of genetic diversity and structure of Vietnamese goat populations using multi locus microsatellite markers. Le Thi Thuy,Luu Quang Minh,Tran Thi Thu Thuy,Nguyen Van Ba,Dinh Van Binh,Nguyen Dang Ton,Han, Jian-Lin,Periasamy, Kathiravan.

[6]Genetic diversity of pepper (Capsicum spp.) germplasm resources in China reflects selection for cultivar types and spatial distribution. Zhang Xiao-min,Zhang Zheng-hai,Gu Xiao-zhen,Mao Sheng-li,Li Xi-xiang,Wang Li-hao,Zhang Bao-xi,Li Xi-xiang,Chadoeuf, Joel,Palloix, Alain. 2016

[7]Genetic diversity and population structure of common bean (Phaseolus vulgaris) landraces from China revealed by a new set of EST-SSR markers. Xu, Shengchun,Hu, Qizan,Liu, Na,Ye, Lingwei,Gong, Yaming,Wang, Guofu,Mao, Weihua.

[8]Isolation and Characterization of New 24 Microsatellite DNA Markers for Golden Cuttlefish (Sepia esculenta). Yuan, Yanjiao,Liu, Shufang,Bai, Cuicui,Liu, Hongbo,Zhuang, Zhimeng,Yuan, Yanjiao,Bai, Cuicui,Liu, Hongbo. 2012

[9]Microsatellite markers reveal genetic divergence among wild and cultured populations of Chinese sucker Myxocyprinus asiaticus. Cheng, W. W.,Wang, D. Q.,Wang, C. Y.,Du, H.,Wei, Q. W.,Cheng, W. W.. 2016

[10]Population structure and conservation genetics of wild rice Oryza rufipogon (Poaceae): a region-wide perspective from microsatellite variation. Gao, LH.

[11]Isolation and characterization of new microsatellite markers from the Japanese scallop (Patinopecten yessoensis). Chen, Meng,Chang, Ya-Qing,Ding, Jun,Sun, Xiao-Wen.

[12]Analysis of genetic structure and relationship among nine indigenous Chinese chicken populations by the Structure program. Li, H. F.,Han, W.,Zhu, Y. F.,Shu, J. T.,Zhang, X. Y.,Chen, K. W..

[13]Genetic Variation and Population Structure of the White Rhinoceros. Hou, Guanyu,Zeng, Hongpu,Wang, Dongjin,Zhou, Hanlin. 2012

[14]Development of Genic Simple Sequence Repeat Panels for Population Classification of Chinese Cymbidium Species. Li, Xiaobai,Xie, Ming,Jin, Liang,Li, Xiaobai,Li, Weirui,Di, Chenlu,Wu, Dianxing,Huang, Cheng.

[15]Association mapping of yield-related traits and SSR markers in wild soybean (Glycine sofa Sieb. and Zucc.). Hu, Zhenbin,Zhang, Dan,Zhang, Guozheng,Kan, Guizhen,Hong, Delin,Yu, Deyue,Hu, Zhenbin,Zhang, Dan. 2014

[16]Analysis of genetic diversity and population structure in a tomato (Solanum lycopersicum L.) germplasm collection based on single nucleotide polymorphism markers. Wang, T.,Wang, T.,Zou, Q. D.,Qi, S. Y.,Wang, X. F.,Wu, Y. Y.,Zhang, Y. M.,Zhang, Z. J.,Li, H. T.,Liu, N.. 2016

[17]Mitochondrial DNA reveals low population differentiation in elongate loach, Leptobotia elongata (Bleeker): implications for conservation. Zhou, Dinggang,Liu, Guangxun,Zhou, Jian. 2012

[18]Genetic Diversity and Structure of Lolium Species Surveyed on Nuclear Simple Sequence Repeat and Cytoplasmic Markers. Cai, Hongwei,Guan, Xuanli,Cai, Hongwei,Guan, Xuanli,Cai, Hongwei,Yuyama, Nana,Cai, Hongwei,Stewart, Alan,Ding, Chenglong,Xu, Nengxiang,Kiyoshi, Takako. 2017

[19]Genetic diversity and population structure of cultivated bromeliad accessions assessed by SRAP markers. Zhang, Fei,Ge, Yaying,Wang, Weiyong,Shen, Xiaolan,Liu, Xiaojing,Liu, Jianxin,Tian, Danqing,Yu, Xinying. 2012

[20]Genetic diversity and population structure of ginseng in China based on RAPD analysis. Zhao, Yan,Xu, Yong-hua,Zhang, Lian-xue,Wang, Shi-jie,Han, Feng-bo,Li, Ru-sheng,Chen, Xiao-lin,Wang, Shi-jie,Li, Gang. 2016

作者其他论文 更多>>

微信小程序