Comparative expression analysis of Calcineurin B-like family gene CBL10A between salt-tolerant and salt-sensitive cultivars in B-oleracea
文献类型： 外文期刊
第一作者： Xu, Ling
作者： Xu, Ling;Zhang, Dayong;Xu, Zhaolong;Huang, Yihong;He, Xiaolan;Wang, Jinyan;Shao, Hongbo;Li, Jianbin;Gu, Minfeng
作者机构：
关键词： Brassica oleracea L;BoCBL10A;Salt-soil agriculture;Salt stress;Sequence and expression difference
期刊名称：SCIENCE OF THE TOTAL ENVIRONMENT （ 影响因子：7.963； 五年影响因子：7.842 ）
ISSN：
年卷期：
页码：
收录情况： SCI
摘要： Calcineurin B-like proteins (CBLs) are plant calcium sensors that play a critical role in the regulation of plant growth and response to stress. Many CBLs have been identified in the calcium signaling pathway in both Arabidopsis and rice. However, information about BoCBLs genes from Brassica oleracea has not been reported. In the present study, we identified 13 candidate CBL genes in the B. oleracea genome based on the conserved domain of the Calcineurin B-like family, and we carried out a phylogenetic analysis of CBLs among Arabidopsis, rice, maize, cabbage and B. oleracea. For B. oleracea, the distribution of the predicted BoCBL genes was uneven among the five chromosomes. Sequence analysis showed that the nucleotide sequences and corresponding protein structure of BoCBLs were highly conserved, i.e., all of the putative BoCBLs contained 6-8 introns, and most of the exons of those genes contained the same number of nucleotides and had high sequence identities. All BoCBLs consisted of four EF-Hand functional domains, and the distance between the EF-hand motifs was conserved. Evolutionary analysis revealed that the CBLs were classified into two subgroups. Additionally, the CBL10A gene was cloned from salt-tolerant (CB6) and salt-sensitive (CB3) cultivars using RT-PCR. The results indicated that the cloned gene had a substantial difference in length (741 by in CB3 and 829 by in CB6) between these two cultivars. The deduced CBL10A protein in CB6 had four EF-hand structural domains, which have an irreplaceable role in calcium-binding and have calcineurin A subunit binding sites, while the BoCBL10A protein in CB3 had only two EF-hand structural domains and lacked calcineurin A subunit binding sites. The expression level of the BoCBL10A gene between salt tolerance (CB6)and sensitive varieties(CB3) under salt stress was significantly different (P < 0.01 and P < 0.05). The expression of BoCBL10A gene was relatively higher in salt-tolerant (CB6) cultivar under salt stress, with a longer period of up-regulation expression and a shorter time responding to salt, compared with the salt-sensitive (CB3) cultivar. We speculate that these differences in the coding region of BoCBL10A may lead to the different salt responses between these two cultivars. (C) 2016 Published by Elsevier B.V.
分类号： X1
- 相关文献
作者其他论文 更多>>
-
Whole-Genome Sequencing of Flammulina filiformis and Multi-Omics Analysis in Response to Low Temperature
作者：Liang, Xinmin;Han, Jing;Shu, Xueqin;Wang, Bo;Jia, Dinghong;Peng, Weihong;He, Xiaolan;Liu, Xun;Cui, Yuqin;Peng, Weihong;Lei, Mengting
关键词：
Flammulina filiformis ; whole-genome sequencing; transcriptome; metabolome; cold adaptation -
Gibberellin-dependent pulp pigmentation in CPPU-induced parthenocarpic melon fruit: Insights from metabolome and transcriptome analysis
作者：Li, Jufen;Ren, Dandan;Lin, Tao;Zhang, Keyan;Ma, Guobin;Yan, Wenjin;Su, Ziwei;Xu, Ling;Zhu, Pinkuan
关键词：Melon; CPPU; Pulp color; Carotenoids; Transcriptome; Metabolome
-
Mulberry (Morus alba L.) planting increased the abundance of soil carbon cycling functional genes by improving soil properties, and further enhanced the stability of soil carbon pool
作者：Zhu, Meina;Yang, Zi;Tsigbey, Victor Edem;Cui, Zipei;Zhang, Wenfeng;Li, Jianbin;Li, Haonan;Shahid, Hanfa;Zhao, Weiguo;Zhu, Meina;Yang, Zi;Tsigbey, Victor Edem;Cui, Zipei;Zhang, Wenfeng;Li, Jianbin;Li, Haonan;Shahid, Hanfa;Zhao, Weiguo;Wang, Zhenjiang;Zhu, Weijun;Qiu, Changyu;Lin, Qiang;Zhao, Mengdi
关键词：Carbon pool stability; Oxidizable organic carbon fraction; Aggregate classification; Ecologically fragile area; Mulberry
-
Application and Possible Mechanism of Microbial Fermentation and Enzyme Catalysis in Regulation of Food Flavour
作者：Wang, Feng;Wang, Mingtong;Xu, Ling;Qian, Jingya;Xu, Baoguo;Gao, Xianli;Ding, Zhongyang;Cui, Kai
关键词：food flavor; microorganisms; enzymes; fermentation; mechanism
-
Genome-wide identification and transcriptome analysis of the cytochrome P450 genes revealed its potential role in the growth of Flammulina filiformis
作者：Liu, Xun;Liang, Xinmin;Han, Jing;Wang, Bo;Jia, Dinghong;Peng, Weihong;He, Xiaolan;Cui, Yuqin;Peng, Weihong;Lei, Mengting
关键词：Cytochrome P450; Gene family; Expression pattern;
Flammulina filiformis -
Transcriptome-based analysis reveals key molecular mechanisms and functional characterization of MaCAX3 gene involved in manganese stress responses in mulberry plants
作者：Li, Jianbin;Ackah, Michael;Shen, Manman;Zhu, Meina;Zhao, Weiguo;Li, Jianbin;Ackah, Michael;Shen, Manman;Zhu, Meina;Zhao, Weiguo;Amoako, Frank Kwarteng;Ackah, Michael;Amoako, Frank Kwarteng;Asare, Aaron Tettey;Wang, Zhenjiang;Lin, Qiang;Qiu, Changyu;Zhao, Mengdi
关键词：
Morus alba ; Manganese; Transcriptome; Gene silencing; Cell wall polysaccharides;MaCAX3 gene; Reactive oxygen species -
Improving the Properties of Laccase Through Heterologous Expression and Protein Engineering
作者：Guan, Guoqiang;Li, Beidian;Xu, Ling;Qian, Jingya;Zou, Bin;Huo, Shuhao;Wang, Feng;Ding, Zhongyang;Cui, Kai
关键词：laccase; heterologous expression; fungi; bacteria; enzyme engineering
