Real-time fluorescence loop-mediated isothermal amplification assay for direct detection of egg drop syndrome virus

文献类型: 外文期刊

第一作者: Zheney, Makay

作者: Zheney, Makay;Zhao, Lingna;Liu, Wei;Liang, Lin;Li, Gang;Zheney, Makay;Kaziyev, Zhambul;Kassenova, Gulmira

作者机构:

关键词: Egg drop syndrome virus;Real-time fluorescence loop-mediated isothermal amplification;Sensitivity;Specificity

期刊名称:BMC VETERINARY RESEARCH ( 影响因子:2.741; 五年影响因子:2.955 )

ISSN: 1746-6148

年卷期: 2018 年 14 卷

页码:

收录情况: SCI

摘要: Background: Egg drop syndrome (EDS), caused by the adenovirus "egg drop syndrome virus" (EDSV) causes severe economic losses through reduced egg production in breeder and layer flocks. The diagnosis of EDSV has been done by molecular tools since its complete genome sequence was identified. In order to enhance the capabilities of the realtime fluorescence loop-mediated isothermal amplification (RealAmp) assay, we aimed to apply the method for direct detection of the EDSV without viral DNA extraction. In order to detect the presence of the EDSV DNA, three pairs of primers were designed, from the conserved region of fiber gene of the EDSV. Results: For our assay, test and control samples were directly used in the reaction mixture in 10-fold serial dilution. The target DNA was amplified at 65 degrees C, which yield positive results in a relatively short period of 40-45 min. The method reported in this study is highly sensitive as compared to polymerase chain reaction (PCR) and showed no sign of cross-reactivity or false positive results. The RealAmp accomplished specific identification of EDSV among a variety of poultry disease viruses. Conclusions: The direct RealAmp can be used to detect the presence of EDSV. As our result showed, the RealAmp method could be suitable for the direct detection of other DNA viruses.

分类号:

  • 相关文献

[1]Rapid detection of porcine parvovirus DNA by sensitive loop-mediated isothermal amplification. Chen, Hao-tai,Zhang, Jie,Yang, Sheng-hai,Ma, Li-na,Ma, Yan-ping,Liu, Xiang-tao,Cai, Xue-peng,Zhang, Yong-guang,Liu, Yong-sheng. 2009

[2]Rapid detection of porcine circovirus type 2 by loop-mediated isothermal amplification. Chen, Hao-tai,Zhang, Jie,Sun, De-hui,Chu, Yue-feng,Cai, Xue-peng,Liu, Xiang-tao,Luo, Xue-nong,Liu, Yong-sheng,Liu, Qing. 2008

[3]Evaluation of Different PCR-Based Assays and LAMP Method for Rapid Detection of Phytophthora infestans by Targeting the Ypt1 Gene. Khan, Mehran,Jiang, Yue,Weng, Qiyong,Chen, Qinghe,Khan, Mehran,Li, Benjin,Weng, Qiyong,Chen, Qinghe. 2017

[4]Rapid detection of duck hepatitis virus type-1 by reverse transcription loop-mediated isothermal amplification. Song, Cuiping,Wan, Hongquan,Yu, Shengqing,Han, Xiangan,Qiu, Xusheng,Hu, Qinghai,Tan, Lei,Ding, Chan.

[5]A sensitive and specific nanoparticle-assisted PCR assay for rapid detection of porcine parvovirus. Cui, Y.,Wang, Z.,Ma, X.,Liu, J.,Cui, S.,Cui, Y.,Cui, S.. 2014

[6]Detection of foot-and-mouth disease virus rna by reverse transcription loop-mediated isothermal amplification. Chen, Hao-tai,Zhang, Jie,Liu, Yong-sheng,Liu, Xiang-tao. 2011

[7]Development and Evaluation of a Reverse Transcription-Loop-Mediated Isothermal Amplification Method for Rapid Detection of Novel Duck Reovirus. Li, Zhao-Long,Chen, Shi-Long,Chen, Shao-Ying,Lin, Feng-Qian,Cheng, Xiao-Xia,Wang, Shao,Zhu, Xiao-Li,Jiang, Bin,Li, Zhao-Long,Chen, Shi-Long,Chen, Shao-Ying,Lin, Feng-Qian,Cheng, Xiao-Xia,Wang, Shao.

[8]Rapid and quantitative detection of Fusarium oxysporum f. sp cubense race 4 in soil by real-time fluorescence loop-mediated isothermal amplification. Peng, Jun,Zhang, He,Zhang, Xin,Xie, Yixian,Hou, Xianwen,Li, Guangyi,Pu, Jinji,Peng, Jun,Chen, Fengping.

[9]Complexity and Specificity of Precursor microRNAs Driven by Transposable Elements in Rice. Yu, Shunwu,Li, Jiajia,Luo, Lijun,Li, Jiajia,Luo, Lijun.

[10]Cloning and characterization of a putative 12-oxophytodienoic acid reductase cDNA induced by osmotic stress in roots of foxtail millet. Zhang, Jin-Peng,Liu, Ting-Song,Zheng, Jun,Jin, Zheng,Zhu, Yun,Guo, Jiu-Feng,Wang, Guo-Ying.

[11]Identification, distribution pattern of IS231 elements in Bacillus thuringiensis and their phylogenetic analysis. Liu, JJ,Song, FP,Shu, CL,Qiu, JZ,Guan, X,Huang, DF,Zhang, J.

[12]Diversity and evolutionary patterns of bacterial gut associates of corbiculate bees. Koch, Hauke,Schmid-Hempel, Paul,Koch, Hauke,Abrol, Dharam P.,Li, Jilian.

[13]Characterization of DNA beta associated with begomoviruses in China and evidence for co-evolution with their cognate viral DNA-A. Zhou, XP,Xie, Y,Tao, XR,Zhang, ZK,Li, ZH,Fauquet, CM.

[14]Comparative genomics identifies the Magnaporthe oryzae avirulence effector AvrPi9 that triggers Pi9-mediated blast resistance in rice. Wu, Jun,Deng, Qiyun,Wu, Jun,Bao, Jiandong,Tang, Mingzhi,Zhu, Xiaoli,Zhou, Bo,Kou, Yanjun,Naqvi, Naweed I.,Bao, Jiandong,Li, Ya,Lu, Guodong,Zhu, Xiaoli,Ponaya, Ariane,Xiao, Gui,Zhou, Bo,Ponaya, Ariane,Cumagun, Christian Joseph R.,Li, Jinbin,Li, Chenyun,Song, Min-Young,Jeon, Jong-Seong.

[15]Processing of delta-endotoxin of Bacillus thuringiensis subsp. kurstaki HD-1 in Heliothis armigera midgut juice and the effects of protease inhibitors. Shao, ZZ,Cui, YL,Liu, XL,Yi, HQ,Ji, JH,Yu, ZN. 1998

[16]Hyperspectral characteristics of winter wheat under freezing injury stress and LWC inversion model. Wang, Huifang,Wang, Jihua,Wang, Qian,Miao, Naizhe,Huang, Wenjiang,Feng, Haikuang,Dong, Yingying,Wang, Huifang,Wang, Jihua. 2012

[17]A reverse transcription loop-mediated isothermal amplification assay to rapidly diagnose foot-and-mouth disease virus C. Ding, Yao-zhong,Zhou, Jian-hua,Ma, Li-na,Qi, Yan-ni,Zhang, Jie,Zhang, Yong-guang,Ding, Yao-zhong,Zhang, Jie,Zhang, Yong-guang,Wei, Gang.

[18]Global-scale modelling of future changes in sown areas of major crops. Wu, Wenbin,Shibasaki, Ryosuke,Yang, Peng,Tan, Guoxin,Matsumura, Kan-ichiro,Sugimoto, Kenji.

[19]Development of a TaqMan MGB RT-PCR for the rapid detection of H3 subtype avian influenza virus circulating in China. Teng, Qiaoyang,Shen, Weixia,Yan, Dawei,Yan, Liping,Li, Xuesong,Li, Guoxin,Yang, Jianmei,Li, Zejun,Teng, Qiaoyang,Yan, Liping,Li, Xuesong,Li, Guoxin,Yang, Jianmei,Li, Zejun.

[20]Comparison of phytotoxicity of copper and nickel in soils with different Chinese plant species. Li Bo,Li Bo,Liu Ji-fang,Ma Yi-bing,Chen Shi-bao,Yang Jun-xing. 2015

作者其他论文 更多>>