Chloroplast and whole-genome sequencing shed light on the evolutionary history and phenotypic diversification of peanuts

文献类型： 外文期刊

第一作者： Zheng, Zheng

作者： Zheng, Zheng;Sun, Ziqi;Qi, Feiyan;Fang, Yuanjin;Lin, Ke;Huang, Bingyan;Dong, Wenzhao;Du, Pei;Tian, Mengdi;Shi, Lei;Xu, Jing;Han, Suoyi;Liu, Hua;Qin, Li;Zhang, Zhongxin;Dai, Xiaodong;Miao, Lijuan;Zhao, Ruifang;Wang, Juan;Zhang, Xinyou;Zheng, Zheng;Sun, Ziqi;Qi, Feiyan;Fang, Yuanjin;Lin, Ke;Huang, Bingyan;Dong, Wenzhao;Du, Pei;Tian, Mengdi;Shi, Lei;Xu, Jing;Han, Suoyi;Liu, Hua;Qin, Li;Zhang, Zhongxin;Dai, Xiaodong;Miao, Lijuan;Zhao, Ruifang;Wang, Juan;Zhang, Xinyou;Zheng, Zheng;Sun, Ziqi;Qi, Feiyan;Fang, Yuanjin;Lin, Ke;Pavan, Stefano;Huang, Bingyan;Dong, Wenzhao;Du, Pei;Tian, Mengdi;Shi, Lei;Xu, Jing;Han, Suoyi;Liu, Hua;Qin, Li;Zhang, Zhongxin;Dai, Xiaodong;Miao, Lijuan;Zhao, Ruifang;Wang, Juan;Liao, Yanlin;Zhang, Xinyou;Zheng, Zheng;Sun, Ziqi;Qi, Feiyan;Du, Pei;Shi, Lei;Liao, Yanlin;Zhang, Xinyou;Pavan, Stefano;Delvento, Chiara;Liao, Yanlin;Maliepaard, Chris;Bai, Yuling;Visser, Richard G. F.;Li, Alun;Ruan, Jue;Cigliano, Riccardo Aiese

作者机构：

期刊名称：NATURE GENETICS （ 影响因子：31.7； 五年影响因子：36.6 ）

ISSN： 1061-4036

年卷期： 2024 年

页码：

收录情况： SCI

摘要： Cultivated peanut (Arachis hypogaea L.) is a widely grown oilseed crop worldwide; however, the events leading to its origin and diversification are not fully understood. Here by combining chloroplast and whole-genome sequence data from a large germplasm collection, we show that the two subspecies of A. hypogaea (hypogaea and fastigiata) likely arose from distinct allopolyploidization and domestication events. Peanut genetic clusters were then differentiated in relation to dissemination routes and breeding efforts. A combination of linkage mapping and genome-wide association studies allowed us to characterize genes and genomic regions related to main peanut morpho-agronomic traits, namely flowering pattern, inner tegument color, growth habit, pod/seed weight and oil content. Together, our findings shed light on the evolutionary history and phenotypic diversification of peanuts and might be of broad interest to plant breeders. Chloroplast and whole-genome sequencing of a global germplasm panel of 355 Arachis accessions encompassing various species sheds light on the evolutionary history and phenotypic diversification of peanuts.

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