Multiple Lines of Evidence from Mitochondrial Genomes Resolve Phylogenetic Relationships of Parasitic Wasps in Braconidae

文献类型： 外文期刊

第一作者： Li, Qian

作者： Li, Qian;Tang, Pu;Wu, Qiong;Shi, Min;Chen, Xue-Xin;Li, Qian;Tang, Pu;Wu, Qiong;Shi, Min;Chen, Xue-Xin;Wei, Shu-Jun;Sharkey, Michael J.

作者机构：

关键词： strand asymmetry;gene rearrangement;phylogeny;Hymenoptera;Braconidae

期刊名称：GENOME BIOLOGY AND EVOLUTION （ 影响因子：3.416； 五年影响因子：4.079 ）

ISSN： 1759-6653

年卷期： 2016 年 8 卷 9 期

页码：

收录情况： SCI

摘要： The rapid increase in the number of mitochondrial genomes in public databases provides opportunities for insect phylogenetic studies; but it also provides challenges because of gene rearrangements and variable substitution rates among both lineages and sites. Typically, phylogenetic studies use mitochondrial sequence data but exclude other features of the mitochondrial genome from analyses. Here, we undertook large-scale sequencing of mitochondrial genomes from a worldwide collection of specimens belonging to Braconidae, one of the largest families of Metazoa. The strand-asymmetry of base composition in the mitochondrial genomes of braconids is reversed, providing evidence for monophyly of the Braconidae. We have reconstructed a backbone phylogeny of the major lineages of Braconidae from gene order of the mitochondrial genomes. Standard phylogenetic analyses of DNA sequences provided strong support for both Cyclostomes and Noncyclostomes. Four subfamily complexes, that is, helconoid, euphoroid, sigalphoid, and microgastroid, within the Noncyclostomes were reconstructed robustly, the first three of which formed a monophyletic group sister to the last one. Aphidiinae was recovered as a lineage sister to other groups of Cyclostomes, while the Ichneutinae was recovered as paraphyletic. Separate analyses of the subdivided groups showed congruent relationships, employing different matrices and methods, for the internal nodes of the Cyclostomes and the microgastroid complex of subfamilies. This research, using multiple lines of evidence from mitochondria' genomes, illustrates multiple uses of mitochondrial genomes for phylogenetic inference in Braconidae.

分类号：

  • 相关文献

[1]Binding Characterization of Recombinant Odorant-binding Proteins from the Parasitic Wasp, Microplitis mediator (Hymenoptera: Braconidae). Zhang, Shuai.

[2]Effects of the Cry1Ac toxin of Bacillus thuringiensis on Microplitis mediator, a parasitoid of the cotton bollworm, Helicoverpa armigera. Liu, XX,Zhang, QW,Zhao, JZ,Cai, QN,Xu, HL,Li, JC. 2005

[3]Identification and expression pattern analysis of chemosensory receptor genes in the Macrocentrus cingulum (Hymenoptera: Braconidae) antennae. Zhang, Tian-tao,Wang, Zhen-ying,He, Kang-lai,Bai, Shu-xiong,Ahmed, Tofael. 2016

[4]Seasonal cues mediate host behaviour modification and cocoon polymorphism in Microplitis mediator (Hymenoptera: Braconidae). Zhang, Jing,Liu, Xiao-Xia,Zhang, Qing-Wen,Michaud, J. P.,Li, Jian-Cheng,Luo, Shu-Ping.

[5]Knockdown of Microplitis mediator Odorant Receptor Involved in the Sensitive Detection of Two Chemicals. Ren, Li-Yan,Zhang, Yong-Jun,Wu, Kong-Ming,Guo, Yu-Yuan,Li, Ke-Ming. 2012

[6]Development of Microplitis bicoloratus on Spodoptera litura and implications for biological control. Luo, Kaijun,Trumble, John T.,Pang, Yi.

[7]Two mitochondrial genomes from the families Bethylidae and Mutillidae: Independent rearrangement of protein-coding genes and higher-level phylogeny of the Hymenoptera. Wei, Shu-Jun,Li, Qian,Chen, Xue-Xin,Wei, Shu-Jun,Li, Qian,Chen, Xue-Xin,Wei, Shu-Jun,van Achterberg, Kees.

[8]The mitochondrial genome of the German wasp Vespula germanica (Fabricius, 1793) (Hymenoptera: Vespoidea: Vespidae). Zhou, Yuan,Xu, Zai-Fu,Hu, Yu-Lin,Wei, Shu-Jun,Hu, Yu-Lin.

[9]The mitochondrial genome of Tenthredo tienmushana (Takeuchi) and a related phylogenetic analysis of the sawflies (Insecta: Hymenoptera). Song, Sheng-Nan,Chen, Xue-Xin,Song, Sheng-Nan,Chen, Xue-Xin,Song, Sheng-Nan,Wang, Ze-Hua,Wei, Shu-Jun,Li, Yue.

[10]The mitochondrial genome of Polistes jokahamae and a phylogenetic analysis of the Vespoidea (Insecta: Hymenoptera). Song, Sheng-Nan,Chen, Xue-Xin,Song, Sheng-Nan,Chen, Xue-Xin,Chen, Peng-Yan,Wei, Shu-Jun.

[11]The mitochondrial genome of Frankliniella intonsa: Insights into the evolution of mitochondrial genomes at lower taxonomic levels in Thysanoptera. Yan, Dankan,Tang, Yunxia,Hu, Min,Liu, Fengquan,Fan, Jiaqin,Yan, Dankan,Tang, Yunxia,Hu, Min,Liu, Fengquan,Fan, Jiaqin,Zhang, Dongfang.

[12]Effects of Bt transgenic cotton lines on the cotton bollworm parasitoid Microplitis mediator in the laboratory. Liu, XX,Zhang, QW,Zhao, JZ,Li, HC,Xu, BL,Ma, XM. 2005

[13]Performance of diapausing parasitoid wasps, Habrobracon hebetor, after cold storage. Chen, Haoliang,Zhang, Hongyu,Chen, Haoliang,Zhang, Hongyu,Chen, Haoliang,Chen, Haoliang,Zhu, Kun Yan,Chen, Haoliang,Throne, James. 2013

[14]Effect of Temperature on Development, Survival, and Fecundity of Microplitis manilae (Hymenoptera: Braconidae). Xu, Zai-Fu,Qiu, Bo,Zhou, Zhong-Shi,Luo, Shu-Ping.

[15]Next-Generation Sequencing of Two Mitochondrial Genomes from Family Pompilidae (Hymenoptera: Vespoidea) Reveal Novel Patterns of Gene Arrangement. Chen, Peng-Yan,Zheng, Bo-Ying,Wei, Shu-Jun,Chen, Peng-Yan,Liu, Jing-Xian. 2016

[16]The complete mitochondrial genome of the beet armyworm Spodoptera exigua (Hubner) (Lepodiptera: Noctuidae). Wu, Qiu-Ling,Gong, Ya-Jun,Wei, Shu-Jun,Wu, Qiu-Ling,Gu, Yun. 2013

[17]Rearrangement of the nad1 gene in Pristaulacus compressus (Spinola) (Hymenoptera: Evanioidea: Aulacidae) mitochondrial genome. Wei, Shu-Jun,Wu, Qiu-Ling,Wei, Shu-Jun,Chen, Xue-Xin,Wu, Qiu-Ling,van Achterberg, Kees. 2015

[18]Complete mitogenome of the Argyrogramma agnata (Lepidoptera: Noctuidae). Gong, Ya-Jun,Wu, Qiu-Ling,Wei, Shu-Jun,Wu, Qiu-Ling.

[19]The complete mitochondrial genome of the codling moth Cydia pomonella (Lepidoptera: Tortricidae). Shi, Bao-Cai,Liu, Wei,Wei, Shu-Jun,Liu, Wei.

[20]The complete mitochondrial genome of the oriental fruit moth Grapholita molesta (Busck) (Lepidoptera: Tortricidae). Gong, Ya-jun,Shi, Bao-cai,Kang, Zong-jiang,Zhang, Fan,Wei, Shu-jun.

作者其他论文 更多>>

微信小程序