Sequencing and Phylogenetic Analysis of Potato virus Y Liaoning Isolate in China
文献类型: 外文期刊
第一作者: Wang Fang
作者: Wang Fang;An Meng-nan;Wu Yuan-hua;Wang Fang;Gao Zheng-liang;Zhou Ben-guo
作者机构:
关键词: PVY Liaoning isolate;cloning;genome sequencing;phylogeny
期刊名称:JOURNAL OF INTEGRATIVE AGRICULTURE ( 影响因子:2.848; 五年影响因子:2.979 )
ISSN: 2095-3119
年卷期: 2013 年 12 卷 7 期
页码:
收录情况: SCI
摘要: Complete genome sequence of Potato virus Y Liaoning isolate (PVY-LN) causing tobacco vein necrosis symptoms were isolated from Liaoning Province in China. Genome sequences of PVY-LN was 9 714 nucleotides in length, excluding the 3'-terminal poly (A) tail. PVY-LN encodes a single long open reading frame (ORF) of polyprotein that is predicted to be cleaved into ten mature proteins by three viral proteases. No recombination can be predicted in PVY-LN sequences compared with that of the other PVY strains using Recombination Detection Programe v. 4.16 (RDP4). Complete genome sequence comparison and phylogenetic analysis indicated that PVY-LN is closely related to PVY necrosis strain (PVYN).
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