Genome Resource for Elsinoe batatas, the Causal Agent of Stem and Foliage Scab Disease of Sweet Potato
文献类型： 外文期刊
作者： Zhang, Xinxin 1 ; Zou, Hongda 1 ; Yang, Yiling 1 ; Fang, Boping 1 ; Huang, Lifei 1 ;
作者机构： 1.Guangdong Acad Agr Sci, Crop Res Inst, Guangdong Prov Key Lab Crops Genet & Improvement, Guangzhou 510640, Guangdong, Peoples R China
关键词： Elsinoe batatas; fungal pathogens; genome; genomics; microbe-genome sequencing; Nanopore single molecule sequencing; sweet potato scab
期刊名称：PHYTOPATHOLOGY （ 影响因子：4.01； 五年影响因子：4.457 ）
ISSN： 0031-949X
年卷期： 2022 年 112 卷 4 期
页码：
收录情况： SCI
摘要： Elsinoe batatas is a phytopathogenic fungus causing stem and foliage scab disease of sweet potato. At present, there is no reference genome available for E. batatas, limiting basic research for the pathogen. The present study applied the Nanopore single-molecule sequencing technology to sequence the E. batatas genome. This study reports the first high-quality genome sequence of E. batatas, with a total contig size of 26.49 Mb, 50.8% GC content, and an N-50 of 2,546,814 bp. The sequences obtained serve as a reference for analysis of E. batatas isolates and provide a resource to better understand the biology of stem and foliage scab disease of sweet potato.
- 相关文献
作者其他论文 更多>>
-
A highly efficient Agrobacterium-mediated infectious system for Sweet potato leaf curl virus and a deltasatellite-based VIGS vector
作者：Zhang, Yi;Yang, Xuangang;Deng, Shulin;Zhang, Yi;Yang, Xuangang;Deng, Shulin;Yang, Xuangang;Huang, Lifei;Deng, Shulin
关键词：Sweetpotato; SPLCV; Infection system; VIGS; Deltasatellite
-
Identification and characterization of two P450 enzymes from Citrus sinensis involved in TMTT and DMNT biosyntheses and Asian citrus psyllid defense
作者：Sun, Xueli;Hu, Chunhua;Yi, Ganjun;Zhang, Xinxin;Sun, Xueli;Hu, Chunhua;Yi, Ganjun;Zhang, Xinxin;Sun, Xueli
关键词：
-
Transcriptomic analysis reveals the defense mechanisms of citrus infested with Diaphorina citri
作者：Sun, Xueli;Yu, Ting;Bin, Minliang;Peng, Xinxiang;Sun, Xueli;Bin, Minliang;Hu, Chunhua;Bi, Fangcheng;Yi, Ganjun;Zhang, Xinxin;Yu, Ting
关键词：Asian citrus psyllid; Citrus; Diaphorina citri; Huanglongbing; Infestation; RNA-seq
-
CsTPS21 encodes a jasmonate-responsive monoterpene synthase producing beta-ocimene in citrus against Asian citrus psyllid
作者：Bin, Minliang;Yi, Ganjun;Zhang, Xinxin;Bin, Minliang;Peng, Xinxiang;Zhang, Xinxin
关键词：Asian citrus psyllid; Citrus sinensis; CsTPS21; beta-ocimene; Herbivore defense; JA pathway
-
Genetic fingerprint construction and genetic diversity analysis of sweet potato (Ipomoea batatas) germplasm resources
作者：Luo, Zhongxia;Yao, Zhufang;Yang, Yiling;Wang, Zhangying;Zou, Hongda;Zhang, Xiongjian;Chen, Jingyi;Fang, Boping;Huang, Lifei
关键词：Sweet potato; Germplasm resources; Genetic markers; Genetic fingerprint; Genetic diversity
-
Effect of cooking methods on metabolites of deep purple-fleshed sweetpotato
作者：Jiang, Xia;Wang, Bin;Jiang, Xia;Zhang, Rong;Yao, Yanqiang;Yang, Yiling;Wang, Bin;Wang, Zhangying;Jiang, Xia;Zhang, Rong;Yao, Yanqiang;Yang, Yiling;Wang, Zhangying;Yao, Yanqiang
关键词：Purple-fleshed sweetpotato; Starch; Volatile organic compounds; Relative odor activity value; Metabolites
-
Feasibility of Detecting Sweet Potato (Ipomoea batatas) Virus Disease from High-Resolution Imagery in the Field Using a Deep Learning Framework
作者：Zeng, Fanguo;Ding, Ziyu;Song, Qingkui;Xiao, Jiayi;Zheng, Jianyu;Li, Haifeng;Yue, Xuejun;Luo, Zhongxia;Wang, Zhangying;Huang, Lifei
关键词：sweet potato; virus disease; deep learning; object detection; high-resolution imagery
