Genetic Diversity in Three Sinipercine Fishes Based on Mitochondrial D-Loop and COX1 Sequences
文献类型： 外文期刊
作者： Lin, Minghui 1 ; Liang, Xu-Fang 1 ; Lu, Ke 1 ; Zeng, Ming 1 ; Gao, Junjie 1 ; Dou, Yaqi 3 ; Kuang, Yulan 1 ; Zhang, Qiwei 1 ;
作者机构： 1.Huazhong Agr Univ, Coll Fisheries, Chinese Perch Res Ctr, Wuhan 430070, Peoples R China
2.Chinese Acad Fishery Sci, Pearl River Fisheries Res Inst, Guangzhou 510380, Peoples R China
3.Hubei Aquat Breeds Intro & Breeding Ctr, Hubei Aquaculture Technol Extens Ctr, Wuhan 430061, Peoples R China
关键词： mandarin fish; golden mandarin fish; population structure; mitochondrial DNA
期刊名称：FISHES （ 影响因子：2.4； 五年影响因子：2.4 ）
ISSN：
年卷期： 2025 年 10 卷 6 期
页码：
收录情况： SCI
摘要： Mandarin fish (Siniperca chuatsi), golden mandarin fish (Siniperca scherzeri), and Coreoperca whiteheadi are three important aquaculture species in China facing several threats to their production. Genetic diversity was assessed by sequencing the mitochondrial D-loop and cox1 regions in 207 individuals across nine populations. The genetic diversity analysis, based on the concatenated sequences, revealed that the total haplotype diversity was high across all sinipercine fish populations. Population differentiation analysis revealed that most genetic variation was within populations: 74.5% in S. chuatsi (p < 0.001) and 83.0% in S. scherzeri (p < 0.001). All five S. chuatsi populations showed moderate and significant genetic differentiation, and moderate genetic differentiation was observed between the Beijiang and Wujiang populations in S. scherzeri. Phylogenetic and nested clade analysis indicated that artificially bred and wild S. chuatsi populations shared haplotypes, and close phylogenetic relationships were observed between the Beijiang and Dongjiang populations in S. scherzeri. These findings could be useful for the conservation management, artificial breeding, and hybridization of these three sinipercine fish species.
- 相关文献
作者其他论文 更多>>
-
Full-Length Transcriptome Sequencing and Comparative Transcriptomics Reveal the Molecular Mechanisms Underlying Gonadal Development in Sleepy Cod (Oxyeleotris lineolata)
作者：Fan, Jiajia;Ma, Dongmei;Zhu, Huaping;Lin, Minghui;Zhong, Zaixuan;Tian, Yuanyuan;Fan, Jiajia;Ma, Dongmei;Zhu, Huaping;Lin, Minghui;Zhong, Zaixuan;Tian, Yuanyuan
关键词：sleepy cod Oxyeleotris lineolata; sexual dimorphism; transcriptome; sex determination; gonadal differentiation
-
Isolation and characterization of 48 SNP markers of sleepy cod, Oxyeleotris lineolata by whole-genome resequencing
作者：Fan, Jiajia;Ma, Dongmei;Zhu, Huaping;Lin, Minghui;Su, Huanhuan;Zhong, Zaixuan;Fan, Jiajia;Ma, Dongmei;Zhu, Huaping;Lin, Minghui;Su, Huanhuan;Zhong, Zaixuan
关键词：Oxyeleotris lineolata; SNP; Whole-genome resequencing; Genetic linkage map; Genetic improvement
-
Identification of an Acinetobacter lwoffii strain isolated from diseased hybrid sturgeon (Acipenser baerii9x Acipenser schrenckii male)
作者：Zhang, Mengjie;Xiao, Zidong;Xue, Mingyang;Jiang, Nan;Liu, Wei;Xu, Chen;Fan, Yuding;Zhou, Yong;Zhang, Mengjie;Zhang, Qinghua;Dou, Yaqi
关键词：Hybrid sturgeon; Acinetobacter lwoffii; Histopathology; Intestinal microflora; Drug sensitivity
-
Phylogeographic structure and population demography of the leopard mandarin fish (Siniperca scherzeri) in the Pearl River drainage
作者：Lin, Minghui;Liang, Xufang;Gao, Junjie;Kuang, Yulan;Zhang, Qiwei;Lin, Minghui;Liang, Xufang;Gao, Junjie;Kuang, Yulan;Zhang, Qiwei;Lin, Minghui;Dou, Yaqi
关键词：Siniperca scherzeri; Mitochondrial control region; Demographic history; Drainage development; Climatic fluctuations
-
Transcriptome analysis of ovarian maturation in a chondrostei Chinese sturgeon Acipenser sinensis
作者：He, Shan;Ren, Ping;Tan, Qing-Song;Liang, Xu-Fang;Du, Hao;Leng, Xiao-Qian;Li, Chuang-Ju;Wei, Qi-Wei
关键词：Chinese sturgeon Acipenser sinensis; ovarian maturation; transcriptome
-
The complete mitochondrial genome of Cichla ocellaris
作者：Lin, Minghui;Mu, Xidong;Yan, Xi;Lin, Minghui
关键词：Mitochondrial genome; Cichlaidae; Cichlao cellaris
-
DEVELOPMENT OF MICROSATELLITE MARKERS IN KMERIA SEPTENTRIONALIS (MAGNOLIACEAE), AN ENDANGERED CHINESE TREE
作者：Lin, Yanfang;Zhang, Qiwei;Wang, Yaofang;Tang, Shaoqing;Lin, Yanfang;Tang, Shaoqing;Zeng, Liyan
关键词：allele;microsatellite primer;polymorphic microsatellite marker: polymorphismSequence DataHQ888826: GenBank;EMBL;DDJB;nucleotid;HQ888827: GenBank;EMBL;DDJB;nucleotide sequence;HQ888828: GenBank;EMBL;DDJB;nucleotide sequence;HQ888829: GenBank;EMBL;DDJB;nucleotide sequence;HQ888830: GenBank;EMBL;DDJB;nucleotide sequence;HQ888831: GenBank;EMBL;DDJB;nucleotide sequence;HQ888832: GenBank;EMBL;DDJB;nucleotide sequence;HQ888833: GenBank;EMBL;DDJB;nucleotide sequence;HQ888834: GenBank;EMBL;DDJB;nucleotide sequence;HQ888835: GenBank;EMBL;DDJB;nucleotide sequence;HQ888836: GenBank;EMBL;DDJB;nucleotide sequence;HQ888837: GenBank;EMBL;DDJB;nucleotide sequence;HQ888838: GenBank;EMBL;DDJB;nucleotide sequence;HQ888839: GenBank;EMBL;DDJB;nucleotide sequence;genetic diversity;mating system;population genetic structure;gene fl ow
