Complete chloroplast genome sequence of Camellia rhytidophylla, comparative and phylogenetic analysis
文献类型： 外文期刊
作者： Liu, Xiao-Fei 1 ; Sun, Ying-Bo 1 ; Huang, Li-Li 1 ; Xu, Ye-Chun 1 ; Zhao, Chao-Yi 1 ; Yu, Bo 1 ;
作者机构： 1.Guangdong Acad Agr Sci, Guangdong Key Lab Ornamental Plant Germplasm Inno, Key Lab Urban Agr South China, Environm Hort Inst,Minist Agr, 1,Jinying East St 1,Wushan Rd, Guangzhou 510640, Guangdong, Peoples R China
关键词： Camellia rhytidophylla; chloroplast genome; phylogenetic analysis
期刊名称：MITOCHONDRIAL DNA PART B-RESOURCES （ 影响因子：0.658； 五年影响因子：0.674 ）
ISSN：
年卷期： 2021 年 6 卷 1 期
页码：
收录情况： SCI
摘要： Camellia rhytidophylla is an endangered plant with economic value. Using Illumina sequencing, the chloroplast genome of C. rhytidophylla was sequenced and analyzed in this study. The complete chloroplast genome is 157,073 bp in length, which consisted of a pair of inverted repeat regions of 26,055 bp (IRa and IRb) separated by a large single-copy region (LSC) of 86,680 bp and a small single-copy region (SSC) of 18,283 bp. The C. rhytidophylla chloroplast genome encodes 135 genes, including 87 protein-coding genes, 37 tRNA genes, 8 rRNA genes, and 3 pseudogenes. Sequence comparison analysis with the chloroplast sequences of 28 other Camellia plants found that C. rhytidophylla had the closest relationship with C. szechuanensis. This study provides a theoretical basis for the analysis of the distant relationship of Camellia.
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