Genome-Wide Identification of Banana Csl Gene Family and Their Different Responses to Low Temperature between Chilling-Sensitive and Tolerant Cultivars
文献类型： 外文期刊
作者： Yuan, Weina 1 ; Liu, Jing 1 ; Takac, Tomas 2 ; Chen, Houbin 1 ; Li, Xiaoquan 3 ; Meng, Jian 1 ; Tan, Yehuan 1 ; Ning, Ton 1 ;
作者机构： 1.South China Agr Univ, Coll Hort, Dept Pomol, Guangzhou 510642, Peoples R China
2.Palacky Univ Olomouc, Czech Adv Technol & Res Inst, Ctr Reg Hana Biotechnol & Agr Res, Olomouc 78375, Czech Republic
3.Guangxi Acad Agr Sci, Inst Biotechnol, Nanning 530007, Peoples R China
4.Guangdong Acad Agr Sci, Inst Fruit Tree Res, Guangzhou 510640, Peoples R China
关键词： banana (Musa spp; ); cellulose synthase-like genes; genome-wide identification; hemicellulose; low temperature stress
期刊名称：PLANTS-BASEL （ 影响因子：3.935； ）
ISSN：
年卷期： 2021 年 10 卷 1 期
页码：
收录情况： SCI
摘要： The cell wall plays an important role in responses to various stresses. The cellulose synthase-like gene (Csl) family has been reported to be involved in the biosynthesis of the hemicellulose backbone. However, little information is available on their involvement in plant tolerance to low-temperature (LT) stress. In this study, a total of 42 Csls were identified in Musa acuminata and clustered into six subfamilies (CslA, CslC, CslD, CslE, CslG, and CslH) according to phylogenetic relationships. The genomic features of MaCsl genes were characterized to identify gene structures, conserved motifs and the distribution among chromosomes. A phylogenetic tree was constructed to show the diversity in these genes. Different changes in hemicellulose content between chilling-tolerant and chilling-sensitive banana cultivars under LT were observed, suggesting that certain types of hemicellulose are involved in LT stress tolerance in banana. Thus, the expression patterns of MaCsl genes in both cultivars after LT treatment were investigated by RNA sequencing (RNA-Seq) technique followed by quantitative real-time PCR (qPCR) validation. The results indicated that MaCslA4/12, MaCslD4 and MaCslE2 are promising candidates determining the chilling tolerance of banana. Our results provide the first genome-wide characterization of the MaCsls in banana, and open the door for further functional studies.
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