Genome-Wide Identification and Transcript Analysis of TCP Gene Family in Banana (Musa acuminata L.)
文献类型： 外文期刊
作者： Wang, Jingyi 1 ; Wang, Zhuo 1 ; Jia, Caihong 1 ; Miao, Hongxia 1 ; Zhang, Jianbin 1 ; Liu, Juhua 1 ; Xu, Biyu 1 ; Jin, Zhiqiang 1 ;
作者机构： 1.Chinese Acad Trop Agr Sci, Inst Trop Biosci & Biotechnol, Minist Agr, Key Lab Trop Crop Biotechnol, 4 Xueyuan Rd, Haikou 571101, Hainan, Peoples R China
2.Chinese Acad Trop Agr Sci, Hainan Acad Trop Agr Resource, Hainan Key Lab Protect & Utilizat Trop Bioresourc, 4 Xueyuan Rd, Haikou 571101, Hainan, Peoples R China
关键词： Banana; Co-expression network; Expression characteristics; MaTCPs; Phylogenetic analysis
期刊名称：BIOCHEMICAL GENETICS （ 影响因子：1.89； 五年影响因子：1.959 ）
ISSN： 0006-2928
年卷期：
页码：
收录情况： SCI
摘要： Plant-specific TEOSINTE-BRANCHED1/CYCLOIDEA/PROLIFERATING CELL FACTOR1 (TCP) gene family has versatile functions in diverse aspects of plants. However, less research on banana TCPs was done comprehensively. Accordingly, 48 banana TCP genes were characterized on aspects of gene structure, conserved motifs, phylogenetic relationship, and expression patterns. Members of the MaTCP gene family were unevenly distributed among 11 chromosomes and purification selection was the driving force of the MaTCP gene family. Gene duplication analysis indicated that segmental duplication is the major contributor to family expansion. Promoter analysis showed that MaTCPs might be involved in banana growth, development, and abiotic stress responses. Further, the expression of 12 MaTCPs was analyzed by real-time quantitative RT-PCR, and the protein interaction analysis showed that MaPCF10 and MaPCF13 may have an important function in banana fruit development and ripening. These results lay the foundation for further study of the functions of TCP genes in banana.
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