您好,欢迎访问中国水产科学研究院 机构知识库!

Isolation and characterization of new microsatellite markers from the Japanese scallop (Patinopecten yessoensis)

文献类型: 外文期刊

作者: Chen, Meng 1 ; Chang, Ya-Qing 1 ; Ding, Jun 1 ; Sun, Xiao-Wen 2 ;

作者机构: 1.DaLian Fisheries Univ, Key Lab Mariculture, Dalian 116023, Liaoning, Peoples R China

2.Chinese Acad Fishery Sci, Heilongjiang Fisheries Res Inst, Harbin 150070, Peoples R China

关键词: Japanese scallop;Microsatellite;Population structure;Twice hybridizations

期刊名称:CONSERVATION GENETICS ( 影响因子:2.538; 五年影响因子:2.32 )

ISSN:

年卷期:

页码:

收录情况: SCI

摘要: Twenty polymorphic microsatellite loci were isolated from the Japanese scallop (Patinopecten yessoensis) using a method of hybridizing twice. The genetic diversity was analyzed by these microsatellite markers in field specimens from Zhangzidao Island in Liaoning Province, China. Observed heterozygosity (H_o), expected heterozygosity (H_e), number of effective alleles (N_e), and polymorphism information contents (PIC) were calculated. The heterozygote deficiency or excess was detected by the fixation index (Fis). The Hardy-Weinberg equilibrium was tested by possibilities (P_(HWE)) using chi-square test. Results indicate that the average of allele numbers was 6. 0. The mean values of the parameters H_o, H_e, N_e, and PIC were 0. 7921, 0. 7076, 4. 4347, and 0. 6684, respectively. Only 4 of 20 microsatellite markers showed heterozygote deficiency including loci FJ262370, FJ262381, FJ262384, and FJ262400. The P_(HWE) value indicates the wild population deviated somewhat from the Hardy-Weinberg equilibrium. These newly isolated markers increase the available molecular resources of the Japanese scallop.

  • 相关文献

[1]Polymorphic microsatellite loci for population studies of the Japanese scallop, Patinopecten yessoensis. Zhao, Ying-Ying,Zhu, Xiao-Chen,Sun, Xiao-Wen,Liang, Li-Qun. 2007

[2]Microsatellite analysis reveals the population structure and migration patterns of Scomber japonicus (Scombridae) with continuous distribution in the East and South China Seas. Zeng, Liyan,Cheng, Qiqun,Chen, Xiaoyong.

[3]Microsatellite markers reveal genetic divergence among wild and cultured populations of Chinese sucker Myxocyprinus asiaticus. Cheng, W. W.,Wang, D. Q.,Wang, C. Y.,Du, H.,Wei, Q. W.,Cheng, W. W.. 2016

[4]Isolation and Characterization of New 24 Microsatellite DNA Markers for Golden Cuttlefish (Sepia esculenta). Yuan, Yanjiao,Liu, Shufang,Bai, Cuicui,Liu, Hongbo,Zhuang, Zhimeng,Yuan, Yanjiao,Bai, Cuicui,Liu, Hongbo. 2012

[5]High polymorphism and moderate differentiation of chub mackerel, Scomber japonicus (Perciformes: Scombridae), along the coast of China revealed by fifteen novel microsatellite markers. Cheng, Qiqun,Zhu, Yuxia,Chen, Xiaoyong.

[6]Investigations on genetic diversity of northern snakehead (Channa argus) populations in China using amplified fragment length polymorphism (AFLP) markers. Zhou, Aiguo,Luo, Junzhi,Zou, Jixing,Zhuo, Xiaolei,Huang, Guiju,Yu, Dahui.

[7]Analysis of genetic diversity and population structure of Pleuronectes yokohamae indicated by AFLP markers. Zhang, Hui,Yu, Han,Zhang, Yan,Zhang, Hui,Gao, Tianxiang,Han, Zhiqiang,Xiao, Yongshuang.

[8]Genetic diversity and relationships of the brown alga Undaria pinnatifida cultivated along the Dalian Coast as revealed by amplified fragment length polymorphism markers. Li, Shiguo,Qiao, Kun,Hou, Hesheng,Li, Shiguo,Shan, Tifeng,Pang, Shaojun.

[9]Population structure and genetic diversity of Ammodytes personatus in the Northwestern Pacific revealed by microsatellites markers. Ren, Gui Jing,Hu, Jing Jie,Gao, Tian Xiang,Han, Zhi Qiang.

[10]Low mtDNA Cytb diversity and shallow population structure of Eleutheronema tetradactylum in the East China Sea and the South China Sea. Wang, Jianjian,Sun, Peng,Yin, Fei.

[11]Development and characterization of microsatellite markers of the eastern keelback mullet (Liza affinis). Liu, L.,Song, N.,Gao, T. X.,Han, Z. Q.,Li, C. H.,Sun, D. R.. 2016

[12]Isolation and characterization of novel polymorphic microsatellite markers for Lutjanus erythropterus. Lin, L.,Li, C. H.,Xu, S. N.,Liu, Y.,Xiao, Y. Y.,Lin, L.,Li, C. H.,Xu, S. N.,Liu, Y.,Xiao, Y. Y.. 2015

[13]Polymorphic microsatellite loci for the Japanese anchovy Engraulis japonicus (Engraulidae). Lin, L.,Zhu, L.,Liu, S. -F.,Zhuang, Z. -M.,Lin, L.,Su, Y. -Q.. 2011

[14]Microsatellite analysis of genetic diversity and population structure of Chinese mitten crab (Eriocheir sinensis). Chang, Yumei,Liang, Liqun,Ma, Haitao,Sun, Xiamen,Chang, Yumei,He, Jianguo,Ma, Haitao. 2008

[15]Polymorphic microsatellite loci for Japanese Spanish mackerel (Scomberomorus niphonius). Lin, L.,Zhu, L.,Liu, S. -F.,Tang, Q. -S.,Zhuang, Z. -M.,Lin, L.,Su, Y. -Q.. 2012

[16]Development of microsatellite markers for Mytilus coruscus (Mytilidae), an economically important mussel in the East China Sea. Guo, B. -Y.,Wu, C. -W.,Zhu, A. -Y.,Ye, Y. -Y.,Liu, C. -L.. 2013

[17]Genetic diversity and population structure of Eleutheronema rhadinum in the East and South China Seas revealed in mitochondrial COI sequences. Sun Xinxu,Xu Dongdong,Lou Bao,Xin Jian,Guo Yaoshi,Ma Shilei,Sun Xinxu,Guo Yaoshi,Ma Shilei,Zhang Tao. 2013

[18]Genetic diversity and population structure of largehead hairtail, Trichiurus japonicus, based on mtDNA control region. Xiao, Yongshuang,Song, Na,Gao, Tianxiang,Xiao, Yongshuang,Li, Jun,Xiao, Yongshuang,Ren, Guijing.

[19]Local adaptation shapes pattern of mitochondrial population structure in Sebastiscus marmoratus. Xu, Sheng-Yong,Song, Na,Sun, Dian-Rong,Gao, Tian-Xiang,Han, Zhi-Qiang,Shui, Bo-Nian.

[20]Demographic analysis based on the growth parameter of sharks. Chen, PM,Yuan, WW.

作者其他论文 更多>>