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Amycolatopsis halophila sp nov., a halophilic actinomycete isolated from a salt lake

文献类型： 外文期刊

作者： Tang, Shu-Kun 1 ; Wang, Yun 3 ; Guan, Tong-Wei 4 ; Lee, Jae-Chan 5 ; Kim, Chang-Jin 5 ; Li, Wen-Jun 1 ;

作者机构： 1.Yunnan Univ, Yunnan Inst Microbiol, Minist Educ, Key Lab Microbial Resources, Kunming 650091, Peoples R China

2.Yunnan Univ, Yunnan Inst Microbiol, Lab Conservat & Utilizat Bioresources, Kunming 650091, Peoples R China

3.Xinjiang Acad Agr Sci, Xinjiang Inst Microbiol, Urumqi 830091, Xinjiang, Peoples R China

4.Tarim Univ, Key Lab Protect & Utilizat Biol Resources Tarim B, Alar 843300, Xinjiang, Peoples R China

5.Funct Metabolite Res Ctr KRIBB, Taejon 305806, South Korea

关键词： Genbank sequence data;salt lake;polyphasic taxonomic study

期刊名称：INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY （ 影响因子：2.747； 五年影响因子：2.889 ）

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收录情况： SCI

摘要： A novel halophilic actinomycete, designated strain YIM 93223(T), was isolated from a salt lake in Xinjiang Province, north-west China, and was subjected to a polyphasic taxonomic study. The isolate grew at 25-45 degrees C, at pH 6-8 and in the presence of 1-15% (w/v) NaCl; no growth was observed in the absence of NaCl. Strain YIM 93223(T) contained meso-diaminopimelic acid, glutamic acid and alanine as cell-wall amino acids, and glucose and galactose as major whole-cell-wall sugars. Major fatty acids were iso-C-16:0, C-16:0 and C-16:1 omega 7C/iso-C-15:0 2-OH. MK-8(H-4) was the predominant menaquinone. The genomic DNA G+C content was 66.1 mol%. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain YIM 93223(T) belongs to the genus Amycolatopsis. It shared highest 16S rRNA gene sequence similarity with Amycolatopsis palatopharyngis 1BDZ(T) (96.6%) and Amycolatopsis marina Ms392A(T) (96.4%), but lower values (94.5-96.2%) with the type strains of other recognized species of the genus Amycolatopsis. On the basis of the data from this polyphasic study, strain YIM 93223(T) is considered to represent a novel species of the genus Amycolatopsis, for which the name Amycolatopsis halophila sp. nov. is proposed. The type strain is VIM 93223(T) (=DSM 45216(T) =KCTC 19403(T)).

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[1]Actinopolyspora alba sp nov and Actinopolyspora erythraea sp nov., isolated from a salt field, and reclassification of Actinopolyspora iraqiensis Ruan et al. 1994 as a heterotypic synonym of Saccharomonospora halophila. Tang, Shu-Kun,Shi, Rong,Zhang, Yun-Jiao,Chen, Chao,Li, Wen-Jun,Tang, Shu-Kun,Shi, Rong,Zhang, Yun-Jiao,Chen, Chao,Li, Wen-Jun,Wang, Yun,Lou, Kai,Klenk, Hans-Peter,Chen, Chao,Ruan, Ji-Sheng,Li, Wen-Jun.

[2]Georgenia halophila sp nov., a halophilic actinobacterium isolated from a salt lake. Tang, Shu-Kun,Li, Wen-Jun,Tang, Shu-Kun,Li, Wen-Jun,Wang, Yun,Lou, Kai,Lee, Jae-Chan,Park, Dong-Jin,Kim, Chang-Jin.

[3]Marinococcus luteus sp nov., a halotolerant bacterium isolated from a salt lake, and emended description of the genus Marinococcus. Wang, Yun,Cao, Lan-Lan,Lou, Kai,Cao, Lan-Lan,Tang, Shu-Kun,Jiang, Cheng-Lin,Xu, Li-Hua,Li, Wen-Jun,Mao, Pei-Hong,Jin, Xiang.

[4]Paenibacillus algorifonticola sp nov., isolated from a cold spring. Yang, Na,Wang, Jian,Ren, Biao,Zhou, Yu-Guang,Li, Wen-Jun,Zhang, Li-Xin,Tang, Qi-Yong,Xie, Yu-Qing,Gu, Mei-Ying,Mao, Jun,Shi, Yu-Hu,Yang, Na,Ren, Biao,Li, Wen-Jun,Li, Wen-Jun,Zhang, Li-Xin,Zhang, Li-Xin.

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