High-Quality Genome and Annotation Resource of Orange Pink Rot Pathogen Trichothecium roseum Strain YXFP-22015 Isolated from Hubei, China
文献类型： 外文期刊
作者： Zhu, Lei 1 ; Wu, Zhaoyuan 1 ; Fang, Wei 1 ; Wang, Yueying 1 ;
作者机构： 1.Hubei Acad Agr Sci, Natl Biopesticide Engn Technol Res Ctr, Hubei Biopesticide Engn Res Ctr, Key Lab Microbial Pesticides,Minist Agr & Rural Af, Wuhan 430064, Peoples R China
关键词： annotation; fungi; high-quality genome; pink rot disease; RNA-seq; Trichothecium roseum
期刊名称：PLANT DISEASE （ 影响因子：4.5； 五年影响因子：5.0 ）
ISSN： 0191-2917
年卷期： 2023 年 107 卷 6 期
页码：
收录情况： SCI
摘要： Trichothecium roseum is widely distributed throughout the world and forms pink powdery molds on various fruits and vegetables, lowering their quality and leading to great economic losses. Due to the limited availability of high-quality genomic and annotation resources, little is known about the pathogenesis of T. roseum at the molecular level. In this study, we reported a high-quality genome assembly of strain YXFP-22015 using Oxford Nanopore Technologies (ONT) for long read sequencing and MGISEQ-2000 for short read sequencing. The genome was also well-annotated based on the combination of RNA-seq by MGISEQ-2000 and in silico prediction. Further analysis on this will contribute to a better understanding of T. roseum infection mechanisms.
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