Construction of a core germplasm bank of upland cotton (Gossypium hirsutum L.) based on phenotype, genotype and favorable alleles
文献类型: 外文期刊
作者: Han, Peng 1 ; Tian, Xiaomin 1 ; Wang, Ying 1 ; Huang, Cong 2 ; Ma, Yizan 2 ; Zhou, Xiaofeng 3 ; Yu, Yu 3 ; Zhang, Dawei 4 ; Xu, Haijiang 4 ; Cao, Yang 5 ; Zhu, Bo 5 ; Feng, Zhenxiu 5 ; He, Shoupu 6 ; Du, Xiongming 6 ; Lin, Zhongxu 1 ; Zhu, Longfu 1 ; You, Chunyuan 7 ; Pan, Zhenyuan 1 ; Nie, Xinhui 1 ;
作者机构: 1.Shihezi Univ, Agr Coll, Key Lab Oasis Ecol Agr Xinjiang Prod & Construct, Shihezi 832003, Xinjiang, Peoples R China
2.Huazhong Agr Univ, Coll Plant Sci & Technol, Natl Key Lab Crop Genet Improvement, Wuhan 430070, Hubei, Peoples R China
3.Xinjiang Acad Agr & Reclamat Sci, Cotton Inst, Shihezi 832000, Xinjiang, Peoples R China
4.Xinjiang Acad Agr Sci, Res Inst Econ Crops, Urumqi 830091, Xinjiang, Peoples R China
5.Xinjiang Prod & Construct Corps, Agr Sci Inst, Div 5, Shuanghe 833400, Xinjiang, Peoples R China
6.Chinese Acad Agr Sci, CAAS, Inst Cotton Res, ICR, Anyang 455000, Henan, Peoples R China
7.Shihezi Acad Agr Sci, Cotton Res Inst, Shihezi 832011, Xinjiang, Peoples R China
关键词: Core germplasm bank; Favorable alleles; Genotype; Phenotype; Upland cotton
期刊名称:GENETIC RESOURCES AND CROP EVOLUTION ( 影响因子:1.876; 五年影响因子:1.864 )
ISSN: 0925-9864
年卷期:
页码:
收录情况: SCI
摘要: Core germplasm banks are constructed to provide breeders with maximum genetic diversity concomitant with minimum genetic redundancy for a faster breeding process with the least number of accessions possible. In this study, we collected a cotton germplasm collection including 477 cotton varieties cultivated in China and 26 introduced from America and the Soviet Union. Three primary germplasm banks (A, B, and C) were constructed based on phenotype, genotype, and favorable alleles, respectively. Accessions common to all three banks were selected to construct a core germplasm bank to faithfully represent the original genetic collection. The resulting core germplasm bank consisted of 85 accessions, accounting for 16.90% of the original germplasm resources. Construction of this core bank was followed by its evaluation based on phenotype, genotype, and favorable alleles. Compared with those of the original germplasm bank, the phenotype ranges of the core germplasm bank decreased slightly, whereas the coefficients of variation increased slightly. Average polymorphism information content and heterozygosity were estimated at 0.166 and 0.232, respectively, accounting for 80.19% and 87.22% of the corresponding values in the original germplasm bank. Additionally, the average number of favorable alleles polymerized in each accession was approximately 54, ranging from 45 to 64. Overall, the core germplasm bank obtained is characterized by great diversity and solid genetic representation; furthermore, it has a high number of favorable alleles. Thus, our study laid the groundwork for cotton germplasm resource collection and preservation, and cotton research and breeding.
- 相关文献
作者其他论文 更多>>
-
Improving cotton productivity and nutrient use efficiency by partially replacing chemical fertilizers with organic liquid fertilizer under mulched drip irrigation
作者:Shi, Xiaojuan;Shi, Feng;Li, Nannan;Tian, Yu;Han, Peng;Luo, Honghai;Hao, Xianzhe;Wang, Jun;Liu, Ping;Hao, Xianzhe;Wang, Jun;Liu, Ping;Luo, Honghai
关键词:Liquid organic fertilizers; Soil organic matter; Plant nutrient uptake; Seed cotton yield; Fertilizer use efficiency
-
Genome-wide association screening and verification of potential genes associated with defoliation rate induced by defoliant in upland cotton
作者:Pan, Zhenyuan;Zhou, Xiaofeng;Li, Juan;Wang, Xuwen;Yu, Yu;Pan, Zhenyuan;Wang, Runze;Ding, Shugen;Han, Peng;Wu, Yuanlong;Nie, Xinhui;Zhao, Zhansheng
关键词:Machine-harvested cotton; Defoliation rate; Genome-wide association study; Favorable allele
-
Expression profile analysis of cotton fiber secondary cell wall thickening stage
作者:Liu, Li;Kong, Xianhui;Wang, Xuwen;Si, Aijun;Wang, Juan;Yu, Yu;Grover, Corrinne E.;Jareczek, Josef;Chen, Zhiwen
关键词:Upland cotton; Sea island cotton; Fiber quality; Gene expression patterns; Secondary cell wall thickening
-
InDel variations and gene expression analysis related to Fusarium wilt resistance in Gossypium barbadense
作者:Liu, Baojun;Qu, Yanying;Gu, Aixing;Han, Wanli;Yu, Yu;Wang, Xuwen;Bai, Jianyu
关键词:
-
Genome-Wide and Expression Pattern Analysis of the DVL Gene Family Reveals GhM_A05G1032 Is Involved in Fuzz Development in G. hirsutum
作者:Jiao, Yang;Zhao, Fuxiang;Yu, Yu;Jiao, Yang;Geng, Shiwei;Li, Shengmei;Su, Zhanlian;Chen, Quanjia;Qu, Yanying
关键词:cotton; DVL; expression pattern; fuzz; WGCNA; VIGS
-
Dissecting the Superior Drivers for the Simultaneous Improvement of Fiber Quality and Yield Under Drought Stress Via Genome-Wide Artificial Introgressions of Gossypium barbadense into Gossypium hirsutum
作者:Han, Bei;Zhang, Wenhao;Wang, Fengjiao;Yue, Pengkai;Liu, Zhilin;Yue, Dandan;Zhang, Bing;Ma, Yizan;Lin, Zhongxu;Zhang, Xianlong;Yang, Xiyan;Lin, Zhongxu;Zhang, Xianlong;Yang, Xiyan;Yu, Yu;Wang, Yanqin
关键词:cotton; drought stress; DRR1; DRT1; QTL
-
Functional characterization of TBL genes revealed the role of GhTBL7 and GhTBL58 in cotton fiber elongation
作者:Kabir, Nosheen;Qanmber, Ghulam;Liu, Zhao;Kabir, Nosheen;Lu, Lili;Qanmber, Ghulam;Liu, Le;Wang, Xuwen;Si, Aijun;Zhang, Lian;Cao, Wei;Yang, Zuoren;Yu, Yu;Yang, Zuoren
关键词:G; hirsutum; TBL; Fiber development; Phylogenetic analysis; Gene silencing