Transcriptome analysis of differentially expressed genes involved in selenium accumulation in tea plant (Camellia sinensis)
文献类型: 外文期刊
作者: Cao, Dan 1 ; Liu, Yanli 1 ; Ma, Linlong 1 ; Jin, Xiaofang 1 ; Guo, Guiyi 2 ; Tan, Rongrong 1 ; Liu, Zheng 1 ; Zheng, Lin; 1 ;
作者机构: 1.Hubei Acad Agr Sci, Fruit & Tea Res Inst, Wuhan, Hubei, Peoples R China
2.Xinyang Agr & Forestry Univ, Henan Key Lab Tea Comprehens Utilizat South Henan, Xinyang, Henan, Peoples R China
期刊名称:PLOS ONE ( 影响因子:3.24; 五年影响因子:3.788 )
ISSN: 1932-6203
年卷期: 2018 年 13 卷 6 期
页码:
收录情况: SCI
摘要: Tea plant (Camellia sinensis) has strong enrichment ability for selenium (Se). Selenite is the main form of Se absorbed and utilized by tea plant. However, the mechanism of selenite absorption and accumulation in tea plant is still unknown. In this study, RNA sequencing (RNA-seq) was used to perform transcriptomic analysis on the molecular mechanism of selenite absorption and accumulation in tea plant. 397.98 million high-quality reads were obtained and assembled into 168,212 unigenes, 89,605 of which were extensively annotated. There were 60,582 and 1,362 differentially expressed genes (DEGs) in roots and leaves, respectively. RNA-seq results were further validated by quantitative RT-PCR. Based on GO terms, the unigenes were mainly involved in cell, binding and metabolic process. KEGG pathway enrichment analysis showed that predominant pathways included ribosome and protein processing in endoplasmic reticulum. Further analysis revealed that sulfur metabolism, glutathione metabolism, selenocompound metabolism and plant hormone signal transduction responded to selenite in tea plant. Additionally, a large number of genes of higher expressions associated with phosphate transporters, sulfur assimilation, antioxidant enzymes, antioxidant substances and responses to ethylene and jasmonic acid were identified. Stress-related plant hormones might play a signaling role in promoting sulfate/selenite uptake and assimilation in tea plant. Moreover, some other Se accumulation mechanisms of tea plant were found. Our study provides a possibility for controlling Se accumulation in tea plant through bio-technologies and will be helpful for breeding new tea cultivars.
- 相关文献
作者其他论文 更多>>
-
A comprehensive metabolomics analysis of volatile and non-volatile compounds in matcha processed from different tea varieties
作者:Huang, Danjuan;Chen, Xun;Tan, Rongrong;Wang, Hongjuan;Jiao, Long;Mao, Yingxin;Tang, Haiyan;Zong, Qingbo
关键词:Matcha; Variety; Characteristic metabolites; Volatile organic compounds (VOCs); Widely targeted metabolome
-
Elucidating the biological characteristics and pathogenicity of the highly virulent G2a porcine epidemic diarrhea virus
作者:Li, Chang;Wu, Qiong;Song, Haofei;Lu, Hongyu;Yang, Keli;Liu, Zewen;Liu, Wei;Gao, Ting;Yuan, Fangyan;Zhu, Jiajia;Guo, Rui;Tian, Yongxiang;Zhou, Danna
关键词:highly virulence; pathogenicity; porcine epidemic diarrhea virus
-
Comparative Transcript Profiling of Resistant and Susceptible Tea Plants in Response to Gray Blight Disease
作者:Tan, Rongrong;Jiao, Long;Huang, Danjuan;Chen, Xun;Wang, Hongjuan;Mao, Yingxin;Tan, Rongrong;Jiao, Long;Huang, Danjuan;Chen, Xun;Wang, Hongjuan;Mao, Yingxin
关键词:tea plant; gray blight disease; Pestealotia theae Steyaert; transcriptome analysis
-
Isolation, identification and characteristics of Bibersteinia trehalosi from goat
作者:Guo, Rui;Yang, Keli;Gao, Ting;Zhu, Jiajia;Liu, Wei;Yuan, Fangyan;Liu, Zewen;Li, Chang;Wu, Qiong;Zhou, Danna;Tian, Yongxiang;Yang, Keli;Gao, Ting;Zhu, Jiajia;Liu, Wei;Yuan, Fangyan;Liu, Zewen;Li, Chang;Wu, Qiong;Zhou, Danna;Xu, Mengen;Nawaz, Shah;Zhou, Danna;Tian, Yongxiang
关键词:Bibersteinia trehalosi; Isolation; Whole-genome; Antibiogram; Pathogenicity
-
Porcine circovirus type 2 ORF5 induces an inflammatory response by up-regulating miR-21 levels through targeting nuclear ssc-miR-30d
作者:Li, Chang;Yang, Keli;Song, Haofei;Xia, Chuqiao;Wu, Qiong;Zhu, Jiajia;Liu, Wei;Gao, Ting;Guo, Rui;Liu, Zewen;Yuan, Fangyan;Tian, Yongxiang;Zhou, Danna
关键词:Porcine circovirus type 2; ORF5; Nuclear ssc-miR-30d; Ssc-miR-21; Inflammatory response
-
Comparative physiological, metabolomic and transcriptomic analyses reveal the mechanisms of differences in pear fruit quality between distinct training systems
作者:Liu, Zheng;Li, Xie-Yu;Yang, Li;Cheng, Yin-Sheng;Nie, Xian-Shuang;Wu, Tao
关键词:Pear fruits; Training systems; Canopy environment; Metabolome; Transcriptome; Phenylpropanoid biosynthesis pathway
-
An efficient method for tracing the geographic origin of Enshi Yulu fresh tea leaves based on near infrared spectroscopy combined with synergy interval PLS and genetic algorithm
作者:Wang, Shengpeng;Feng, Lin;Liu, Panpan;Gui, Anhui;Gao, Shiwei;Teng, Jing;Ye, Fei;Wang, Xueping;Xue, Jinjin;Zheng, Pengcheng;Wang, Shengpeng;Feng, Lin;Liu, Panpan;Gui, Anhui;Gao, Shiwei;Teng, Jing;Ye, Fei;Wang, Xueping;Xue, Jinjin;Zheng, Pengcheng;Song, Zhiyu;Jiang, Zixiang
关键词:Fresh tea leaves; Geographic origin; Near infrared spectroscopy; Partial least squares; Genetic algorithm