Metagenomic insights into the abundance and composition of resistance genes in aquatic environments: Influence of stratification and geography
文献类型： 外文期刊
作者： Yang, Yuyi 1 ; Li, Zan 3 ; Song, Wenjuan 4 ; Du, Linna 5 ; Ye, Chen 1 ; Zhao, Bo 6 ; Liu, Wenzhi 1 ; Deng, Danli 1 ; Pan, Yo 1 ;
作者机构： 1.Chinese Acad Sci, Wuhan Bot Garden, Key Lab Aquat Bot & Watershed Ecol, Wuhan 430074, Hubei, Peoples R China
2.Univ Dundee, Sch Life Sci, Dundee DD1 5EH, Scotland
3.Ludong Univ, Sch Agr, Yantai 264025, Peoples R China
4.Chinese Acad Sci, Xinjiang Inst Ecol & Geog, Urumqi 830011, Peoples R China
5.Wenzhou Vocat Coll Sci & Technol, Dept Agr & Biotechnol, Wenzhou 325006, Peoples R China
6.Northeast Elect Power Univ, Sch Automat Engn, Jilin 132012, Jilin, Peoples R China
7.Univ Chinese Acad Sci, Coll Life Sci, Beijing 100049, Peoples R China
8.Zhejiang Acad Agr Sci, Inst Environm Resources & Soil Fertilizers, Hangzhou 310021, Zhejiang, Peoples R China
9.Jianghan Univ, Sch Life Sci, Wuhan 430056, Hubei, Peoples R China
关键词： Metagenomic analysis; Bacitracin resistance genes; Mercury resistance genes; Stratification; Principal coordinates analysis
期刊名称：ENVIRONMENT INTERNATIONAL （ 影响因子：9.621； 五年影响因子：10.72 ）
ISSN： 0160-4120
年卷期： 2019 年 127 卷
页码：
收录情况： SCI
摘要： A global survey was performed with 122 aquatic metagenomic DNA datasets (92 lake water and 30 seawater) obtained from the Sequence Read Archive (SRA). Antibiotic resistance genes (ARGs) and metal resistance genes (MRGs) were derived from the dataset sequences via bioinformatic analysis. The relative abundances of ARGs and MRGs in lake samples were in the ranges ND (not detected)-1.34x10(0) and 1.22x10(-3) -1.98x10(-1) copies per 16S rRNA, which were higher than those in seawater samples. Among ARGs, multidrug resistance genes and bacitracin resistance genes had high relative abundances in both lake and sea water samples. Multimetal resistance genes, mercury resistance genes and copper resistance genes had the greatest relative abundance for MRGs. No significant difference was found between epilimnion and hypolimnion in abundance or the Shannon diversity index for ARGs and MRGs. Principal coordinates analysis and permutational multivariate analysis of variance (PERMANOVA) test showed that stratification and geography had significant influence on the composition of ARGs and MRGs in lakes (p < 0.05, PERMANOVA). Coastal seawater samples had significantly greater relative abundance and a higher Shannon index for both ARGs and MRGs than deep ocean and Antarctic seawater samples (p < 0.05, Kruskal-Wallis one-way ANOVA), suggesting that human activity may exert more selective pressure on ARGs and MRGs in coastal areas than those in deep ocean and Antarctic seawater.
- 相关文献
作者其他论文 更多>>
-
One-step microwave method synthesis of N, S-codoped carbon with the frustrated Lewis pairs for Cr (VI) removal
作者：Wang, Liwen;Sha, Yixin;Bi, Changjun;Lin, Daoqing;Wang, Xiaozhi;Jrar, Jawad Ahmad;Hou, Jianhua;Liu, Yuxue;Wang, Xiaozhi;Lin, Hui;Dai, Lichun;Hou, Jianhua
关键词：Cr(VI) reduction; Microwave; Co-doping carbon; Frustrated-Lewis-pair; Absorption
-
The effect of [Br/Zn] content on the structure and photocatalytic performance of BiOBr/ZnO based composite coatings on NiO/Ni foam
作者：Li, Dayu;Li, Longfei;Liu, Yuxue;Lin, Hui;Wang, Yichen;Zhang, Yongcai;Wang, Yichen;Li, Hongbin;Hou, Zhenhua;Asghar, Zeeshan;Hou, Jianhua
关键词：BiOBr/ZnO composite; Solvothermal synthesis method; Nickel foam; Coating
-
Humic acid-supported nanoscale zero-valent iron for sustainable cadmium remediation and crop safety in farmland soil
作者：Liu, Yangzhi;Yang, Chenghu;Cheng, Qilu;Liu, Yingxia;Gao, Chengxiang;Ma, Jinchuan;Lin, Hui;Ma, Junwei;Zhou, Dongren;Huang, Peng;Zhang, Jing;Wang, Honghui
关键词：Humic acid-supported nanoscale zero-valent iron; Cadmium stabilization; Safe crop production; Iron metabolism; Nitrogen cycling
-
Effects of Increasing CO2 Concentration on Crop Growth and Soil Ammonia-Oxidizing Microorganisms in a Fababean (Vicia faba L.) and Wheat (Triticum aestivum Yunmai) Intercropping System
作者：Dong, Xingshui;Lin, Hui;Wang, Feng;Ma, Junwei;Dong, Xingshui;Shi, Songmei;He, Xinhua;He, Xinhua;He, Xinhua
关键词：fababean; wheat; intercropping; elevated CO2; ammonia-oxidizing microorganisms
-
Multiomics Analysis Reveals Key Targeted Metabolic Pathways Underlying the Hormesis and Detrimental Effects of Enrofloxacin on Rice Plants
作者：Chen, Lili;Xu, Zelong;He, Yuqing;Zhang, Xueying;Li, Linying;Hong, Gaojie;Zhu, Ranfeng;Zhang, Zulin;Lin, Hui
关键词：enrofloxacin; hormesis; phytohormone; ROS; flavonoid; transcriptome; metabolome; rice
-
A rapid microwave-assisted technique to synthesize micro-mesoporous biochar intercalated with Zn2+for efficient removal of Cr(VI)
作者：Wang, Yuning;Zhuo, Zhao;Yin, Jin;Fang, Liang;Bilal, Muhammad;Wang, Xiaozhi;Hou, Jianhua;Bilal, Muhammad;Liu, Yuxue;Lin, Hui;Wang, Yuying;Wang, Xiaozhi;Hou, Jianhua
关键词：Biochar; ZnCl 2; Hierarchical porous structure; Hexavalent chromium
-
Structural engineering of Ti3C2-TiO2 nanoflowers modified with oxygen vacancy for photocatalytic applications
作者：Asghar, Zeeshan;Rehman, Zia Ur;Hou, Jianhua;Wang, Xiaozhi;Asghar, Zeeshan;Rehman, Zia Ur;Butt, Faheem K.;Zheng, Kewang;Liu, Yuxue;Lin, Hui;Zhang, Yongcai
关键词：Dye degradation; Photocatalysis; Photocatalytic H2 evolution; CO2 reduction
