Construction of Chromosome Segment Substitution Lines and Inheritance of Seed-Pod Characteristics in Wild Soybean
文献类型: 外文期刊
作者: Zheng, Haiyang 1 ; Hou, Lilong 1 ; Xie, Jianguo 2 ; Cao, Fubin 1 ; Wei, Ruru 1 ; Yang, Mingliang 1 ; Qi, Zhaoming 1 ; Zhu, Rongsheng 1 ; Zhang, Zhanguo 1 ; Xin, Dawei 1 ; Li, Candong 3 ; Liu, Chunyan 1 ; Jiang, Hongwei 2 ; Chen, Qingshan 1 ;
作者机构: 1.Northeast Agr Univ, Harbin, Peoples R China
2.Soybean Res Inst, Jilin Acad Agr Sci, Changchun, Peoples R China
3.Heilongjiang Acad Agr Sci, Jiamusi Branch Inst, Jiamusi, Peoples R China
关键词: CSSLs; high-density Bin-Map; QTLs; wild soybean; seed-pod characteristics
期刊名称:FRONTIERS IN PLANT SCIENCE ( 影响因子:6.627; 五年影响因子:7.255 )
ISSN: 1664-462X
年卷期: 2022 年 13 卷
页码:
收录情况: SCI
摘要: Genetic populations provide the basis for genetic and genomic research, and chromosome segment substitution lines (CSSLs) are a powerful tool for the fine mapping of quantitative traits, new gene mining, and marker-assisted breeding. In this study, 213 CSSLs were obtained by self-crossing, backcrossing, and marker-assisted selection between cultivated soybean (Glycine max [L.] Merr.) variety Suinong14 (SN14) and wild soybean (Glycine soja Sieb. et Zucc.) ZYD00006. The genomes of these 213 CSSLs were resequenced and 580,524 single-nucleotide polymorphism markers were obtained, which were divided into 3,780 bin markers. The seed-pod-related traits were analyzed by quantitative trait locus (QTL) mapping using CSSLs. A total of 170 QTLs were detected, and 32 QTLs were detected stably for more than 2 years. Through epistasis analysis, 955 pairs of epistasis QTLs related to seed-pod traits were obtained. Furthermore, the hundred-seed weight QTL was finely mapped to the region of 64.4 Kb on chromosome 12, and Glyma.12G088900 was identified as a candidate gene. Taken together, a set of wild soybean CSSLs was constructed and upgraded by a resequencing technique. The seed-pod-related traits were studied by bin markers, and a candidate gene for the hundred-seed weight was finely mapped. Our results have revealed the CSSLs can be an effective tool for QTL mapping, epistatic effect analysis, and gene cloning.
- 相关文献
作者其他论文 更多>>
-
Integrated examination of the transcriptome and metabolome of the gene expression response and metabolite accumulation in soybean seeds for seed storability under aging stress
作者:Li, Guang;Xie, Jianguo;Zhang, Wei;Meng, Fanfan;Fan, Xuhong;Sun, Xingmiao;Zheng, Yuhong;Zhang, Yunfeng;Wang, Mingliang;Wang, Shuming;Jiang, Hongwei;Yang, Mingliang;Chen, Qingshan
关键词:soybean; aging; caffeic acid; transcriptome; metabolomic
-
The impact of GmTSA and GmALS on soybean salt tolerance: uncovering the molecular landscape of amino acid and secondary metabolism pathways
作者:Sun, Minghao;Wei, Siming;Liu, Jiarui;Zhang, Yu;Hu, Limin;Piao, Jingxi;Liang, Zhao;Xin, Dawei;Zhao, Ying;Chen, Qingshan;Liu, Chunyan;Qi, Zhaoming;Foyer, Christine H.;Wang, Luyao;Jiang, Hongwei
关键词:
-
Genetic variation in GmCRP contributes to nodulation in soybean (Glycine max Merr.)
作者:Wang, Jinhui;Ma, Chao;Ma, Shengnan;Zheng, Haiyang;Tian, Huilin;Wang, Xi;Wang, Yue;Zhang, Zhanguo;Liu, Chunyan;Yang, Mingliang;Chen, Qingshan;Xin, Dawei;Jiang, Hongwei;Wang, Jiangxu
关键词:Soybean; Symbiosis; Effector; NopC; Natural varieties
-
Dynamics of cis- regulatory sequences and transcriptional divergence of duplicated genes in soybean
作者:Fang, Chao;Zhao, Hainan;Ae, Jiming Jiang;Yang, Mingyu;Tang, Yuecheng;Meng, Fanli;Tang, Yuecheng;Ni, Hejia;Chen, Qingshan;Zhang, Ling;Ae, Jiming Jiang;Ae, Jiming Jiang
关键词:gene duplication; transcriptional divergence; accessible chromatin region; MNase hypersensitivity; CRISPR/Cas
-
Natural variation in Fatty Acid 9 is a determinant of fatty acid and protein content
作者:Qi, Zhaoming;Li, Hui;Jong, CholNam;Zhang, Yu;Hu, Limin;Wu, Xiaoxia;Xin, Dawei;Yang, Mingliang;Liu, Chunyan;Chen, Qingshan;Guo, Chaocheng;Yu, Guolong;Wang, Xu;Li, Haiyang;Kong, Fanjiang;Qiu, Hongmei;Lv, Jian
关键词:Soybean; Seed fatty acid content; Seed protein content; Natural variation; Domestication
-
A loss-of-function mutant allele of a glycosyl hydrolase gene has been co-opted for seed weight control during soybean domestication
作者:Wei, Siming;Yong, Bin;An, Zhenghong;Wang, Yan;Li, Bingbing;Yang, Ce;Zhu, Weiwei;He, Chaoying;Wei, Siming;Yong, Bin;An, Zhenghong;Wang, Yan;Li, Bingbing;Yang, Ce;Zhu, Weiwei;He, Chaoying;Wei, Siming;Yong, Bin;An, Zhenghong;Li, Bingbing;Yang, Ce;Zhu, Weiwei;He, Chaoying;Jiang, Hongwei;Chen, Qingshan;Jiang, Hongwei;He, Chaoying
关键词:domestication; frameshift mutation; QTL; seed weight; soybean; to gain by loss
-
QTL mapping and candidate gene analysis of low-temperature tolerance at the germination stage of soybean
作者:Zheng, Liping;Xie, Jianguo;Sun, Xingmiao;Zheng, Yuhong;Meng, Fanfan;Fan, Xuhong;Li, Guang;Zhang, Yunfeng;Wang, Mingliang;Zhou, Ruo;Qiu, Hongmei;Wang, Shuming;Jiang, Hongwei;Qiu, Hongmei;Wang, Shuming;Jiang, Hongwei
关键词:candidate genes; haplotype; low-temperature tolerance at the germination stage of soybean; QTL