Genome-Wide Identification and Expression Analysis of the 14-3-3 (TFT) Gene Family in Tomato, and the Role of SlTFT4 in Salt Stress
文献类型: 外文期刊
作者: Jia, Chunping 1 ; Guo, Bin 1 ; Wang, Baike 1 ; Li, Xin 1 ; Yang, Tao 1 ; Li, Ning 1 ; Wang, Juan 1 ; Yu, Qinghui 1 ;
作者机构: 1.Xinjiang Acad Agr Sci, Inst Hort Crops, Key Lab Genome Res & Genet Improvement Xinjiang Ch, Urumqi 830091, Peoples R China
2.Xinjiang Univ, Coll Life Sci & Technol, Urumqi 830046, Peoples R China
3.State Key Lab Genet Improvement & Germplasm Innova, Urumqi 830091, Peoples R China
4.Xinjiang Agr Univ, Coll Comp & Informat Engn, Urumqi 830052, Peoples R China
关键词: tomato; 14-3-3; TFT; genome-wide identification; evolutionary analyses; expression patterns; abiotic stresses; phytohormone treatments
期刊名称:PLANTS-BASEL ( 影响因子:4.658; 五年影响因子:4.827 )
ISSN:
年卷期: 2022 年 11 卷 24 期
页码:
收录情况: SCI
摘要: The 14-3-3 proteins, which are ubiquitous and highly conserved in eukaryotic cells, play an essential role in various areas of plant growth, development, and physiological processes. The tomato is one of the most valuable vegetable crops on the planet. The main objective of the present study was to perform genome-wide identification and analysis of the tomato 14-3-3 (SlTFT) family to investigate its response to different abiotic stresses and phytohormone treatments in order to provide valuable information for variety improvement. Here, 13 SlTFTs were identified using bioinformatics methods. Characterization showed that they were categorized into epsilon and non-epsilon groups with five and eight members, accounting for 38.5% and 61.5%, respectively. All the SlTFTs were hydrophilic, and most of them did not contain transmembrane structural domains. Meanwhile, the phylogeny of the SlTFTs had a strong correlation with the gene structure, conserved domains, and motifs. The SlTFTs showed non-random chromosomal distribution, and the promoter region contained more cis-acting elements related to abiotic stress tolerance and phytohormone responses. The results of the evolutionary analysis showed that the SlTFTs underwent negative purifying selection during evolution. Transcriptional profiling and gene expression pattern analysis showed that the expression levels of the SlTFTs varied considerably in different tissues and periods, and they played a specific role under various abiotic stresses and phytohormone treatments. Meanwhile, the constructed protein-based interaction network systematically broadens our understanding of SlTFTs. Finally, the virus-induced gene silencing of SlTFT4 affected the antioxidant and reactive oxygen species defense systems, increased the degree of cellular damage, and reduced salt resistance in tomatoes.
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