Transcriptome Analysis Reveals Genes Contributed to Min Pig Villi Hair Follicle in Different Seasons
文献类型: 外文期刊
作者: Tian, Ming 1 ; He, Xinmiao 1 ; Wang, Wentao 1 ; Feng, Yanzhong 1 ; Zhang, Dongjie 1 ; Li, Zhongqiu 1 ; Liu, Di 1 ;
作者机构: 1.Heilongjiang Acad Agr Sci, Inst Anim Husb, Harbin 150086, Peoples R China
关键词: Min pig; villi hair follicle; season
期刊名称:VETERINARY SCIENCES ( 影响因子:2.518; )
ISSN:
年卷期: 2022 年 9 卷 11 期
页码:
收录情况: SCI
摘要: Simple Summary In this research, we described the phenotype of Min pig dermal villi and sequenced the mRNA transcriptome of Min pig hair follicles. The results showed that the hair growth in Min pigs was regulated by an interaction network composed of eight core genes. The Min pig, a local pig breed in China, has a special trait which has intermittent villus and coat hair regeneration. However, the regulation and mechanism of villus in Min pigs have not yet been described. We observed and described the phenotype of Min pig dermal villi in detail and sequenced the mRNA transcriptome of Min pig hair follicles. A total of 1520 differentially expressed genes (DEG) were obtained.K-means hierarchical clustering showed that there was a significant expression pattern difference in winter compared with summer. Gene enrichment and network analysis results showed that the hair growth in Min pigs was closely related to the composition of desmosomes and regulated by an interaction network composed of eight core genes, namely DSP, DSC3, DSG4, PKP1, TGM1, KRT4, KRT15, and KRT84. Methylation analysis of promoters of target genes showed that the PKP1 gene was demethylated. Our study will help to supplement current knowledge of the growth mechanism of different types of hair.
- 相关文献
作者其他论文 更多>>
-
Pioneer Transcription Factors: The First Domino in Zygotic Genome Activation
作者:Fu, Bo;Ma, Hong;Liu, Di;Fu, Bo;Ma, Hong;Liu, Di
关键词:pioneer transcription factors; preimplantation embryo; zygotic genome activation; retrotransposons
-
Differential expression of ADRB1 causes different responses to norepinephrine in adipocytes of Duroc-Landrace-Yorkshire pigs and min pigs
作者:Zhao, Yuelei;Li, Xuexin;Yu, Wensai;Lin, Weimin;Wei, Wei;Zhang, Lifan;Chen, Jie;Liu, Di;Ma, Hong
关键词:Adipocyte; Norepinephrine; Browning; Min pigs; Duroc-Landrace-Yorkshire pigs
-
Population genetics reveals new introgression in the nucleus herd of min pigs
作者:Liu, Tianxin;Ji, Dongqing;Li, Xinyuan;Liu, Jiadong;Xu, Fei;Miao, Zhiying;Chang, Yang;Xu, Chunzhu;Tian, Ming
关键词:Min pigs; Genetic structure; Introgression; Microsatellite loci; D-loop; Y chromosome
-
The Role of β3-Adrenergic Receptors in Cold-Induced Beige Adipocyte Production in Pigs
作者:Yang, Shuo;Yang, Xiuqin;Ma, Hong;Wang, Liang;Wang, Fang;Liu, Di;Xia, Jiqiao;Liu, Dongyu;Mu, Linlin
关键词:cold stress; piglets; ADRB3; beige adipocytes; thermogenesis
-
Network Meta-Analysis: Effect of Cold Stress on the Gene Expression of Swine Adipocytes ATGL, CIDEA, UCP2, and UCP3
作者:Guo, Zhenhua;Liu, Di;Ma, Hong;Wang, Liang;Fu, Bo;Wang, Fang;Lv, Lei
关键词:beige adipose tissue; fat; pig; UCP1
-
TAP2 Effect on Min-Pig Stromal Vascular Fraction Cell Gene Expression
作者:Wang, Liang;Liu, Di;Ma, Hong;Zhang, Dongjie;He, Xinmiao;Wang, Wentao;Fu, Bo;Li, Zhongqiu;Guo, Zhenhua
关键词:gene interference; gene overexpression; Min-pig; SVF cells; TAP2
-
Essential roles of the nucleolus during early embryonic development: a regulatory hub for chromatin organization
作者:Fu, Bo;Ma, Hong;Liu, Di;Fu, Bo;Ma, Hong;Liu, Di
关键词:preimplantation embryo; nucleolus precursor bodies; chromatin organization; Dux; totipotency; somatic cell nuclear transfer