A one-step molecular biology method for simple and rapid detection of grass carp Ctenopharyngodon idella reovirus (GCRV) HZ08 strain
文献类型: 外文期刊
作者: Zeng, W. W. 1 ; Wang, Q. 1 ; Wang, Y. Y. 1 ; Xu, D. H. 2 ; Wu, S. Q. 1 ;
作者机构: 1.Chinese Acad Fishery Sci, Pearl River Fishery Res Inst, Guangzhou 510380, Guangdong, Peoples R China
2.ARS, Aquat Anim Hlth Res Lab, Auburn, AL 36832 USA
关键词: diagnosis technique;GCRV;RT-LAMP;segment 6 gene
期刊名称:JOURNAL OF FISH BIOLOGY ( 影响因子:2.051; 五年影响因子:2.25 )
ISSN:
年卷期:
页码:
收录情况: SCI
摘要: Six reverse-transcription loop-mediated isothermal amplification (RT-LAMP) primers designed against conserved regions of segment 6 (s6) gene were used for the detection of grass carp Ctenopharyngodon idella reovirus (GCRV) HZ08 subtype. The entire amplification could be completed within 40 min at 62 center dot 3 degrees C. The RT-LAMP showed higher sensitivity than reverse-transcription polymerase chain reaction (RT-PCR). The RNA detection limit was 10 copies mu l1 for RT-LAMP assay and 100 copies mu l1 for conventional RT-PCR. In specificity tests, no cross-reactivity was detected in other viruses from common aquatic animals. In addition, the reaction results can be visualized by using calcein fluorescent dye. Furthermore, a total of 86 samples were tested by RT-LAMP, RT-PCR and virus isolation. The results demonstrated that all 54 specimens identified as positive by virus isolation were also positive when detected by RT-LAMP. Seven out of 54 samples, however, were misidentified by RT-PCR. The RT-LAMP method is more accurate than conventional RT-PCR. The results indicate that RT-LAMP has potential as a simple and rapid diagnosis technique for the detection of GCRV HZ08 subtype infection.
- 相关文献
作者其他论文 更多>>
-
Bacillus velezensis WLYS23 strain possesses antagonistic activity against hybrid snakehead bacterial pathogens
作者:Zhang, D. F.;Xiong, X. L.;Wang, Y. J.;Gao, Y. X.;Ren, Y.;Wang, Q.;Shi, C. B.;Zhang, D. F.;Xiong, X. L.;Wang, Y. J.;Gao, Y. X.;Ren, Y.;Wang, Q.;Shi, C. B.
关键词:antagonistic activity; Bacillus velezensis; disease resistance; genome sequencing; snakehead fish
-
Koi herpesvirus (KHV) and KHV disease (KHVD) - a recently updated overview
作者:Bergmann, S. M.;Jin, Y.;Franzke, K.;Klafack, S.;Grunow, B.;Wang, Q.;Klafack, S.
关键词:aquaculture; diseases; fish (live); genetic; KHV; KHVD; viruses
-
Determination of 23 perfluorinated alkylated substances in water and suspended particles by ultra-performance liquid chromatography/tandem mass spectrometry
作者:Wang, X. F.;Wang, Q.;Li, Z. G.;Huang, K.;Li, L. D.;Zhao, D. H.;Wang, X. F.;Wang, Q.;Li, Z. G.;Huang, K.;Li, L. D.;Zhao, D. H.;Wang, X. F.;Wang, Q.;Li, Z. G.;Huang, K.;Li, L. D.;Zhao, D. H.
关键词:Perfluorinated alkylated substances; water samples; suspended particle samples; ultra-performance liquid chromatography/tandem mass spectrometry; solid phase extraction; dispersive solid phase extraction; determination
-
Immune responses by dietary supplement with Astragalus polysaccharides in the Pacific white shrimp, Litopenaeus vannamei
作者:Chang, Z. -Q.;Ge, Q. -Q.;Sun, M.;Wang, Q.;Li, J.;Lv, H. -Y.
关键词:additives; enzymes; immunity; Pacific white shrimp; phagocytic activity; polysaccharides
-
Aeromonas shuberti as a cause of multi-organ necrosis in internal organs of Nile tilapia, Oreochromis niloticus
作者:Liu, C.;Chang, O. Q.;Zhang, D. F.;Li, K. B.;Wang, F.;Lin, M. H.;Shi, C. B.;Jiang, L.;Wang, Q.;Bergmann, S. M.
关键词:Aeromonas schubertii; infection; nile tilapia; Nodules; pathogenicity
-
Establishment and characterization of a new cell line from koi brain (Cyprinus carpio L.)
作者:Wang, Y.;Zeng, W.;Wang, Q.;Li, Y.;Zheng, S.;Ren, Y.;Liu, C.;Chang, O.;Bergmann, S. M.;Lee, P.
关键词:brain tissue;cell line;koi;koi herpesvirus
-
Competition of infectious hypodermal and haematopoietic necrosis virus (IHHNV) with white spot syndrome virus (WSSV) for binding to shrimp cellular membrane
作者:Yan, D. C.;Liu, X.;Yan, D. C.;Huang, J.;Yang, B.;Sun, H. S.;Wang, Y. Y.
关键词:binding; cellular membrane; infectious hypodermal and haematopoietic necrosis (IHHNV); Litopenaeus vannamei; white spot syndrome virus (WSSV)