您好，欢迎访问广东省农业科学院 机构知识库！
广东省农业科学院机构知识库

全部

  • 全部
  • 标题
  • 学者
  • 机构
  • 关键词

Multilocus sequence typing of Enterocytozoon bieneusi in nonhuman primates in China

文献类型： 外文期刊

作者： Karim, Md Robiul 1 ; Wang, Rongjun 1 ; He, Xiaoyi 2 ; Zhang, Longxian 1 ; Li, Jian 3 ; Rume, Farzana Islam 4 ; Dong, H 1 ;

作者机构： 1.Henan Agr Univ, Coll Anim Sci & Vet Med, Zhengzhou 450002, Peoples R China

2.Cent S Univ, Xiangya Sch Med, Changsha 410013, Hunan, Peoples R China

3.Guangxi Univ, Coll Anim Sci & Technol, Nanning 530004, Peoples R China

4.Patuakhali Sci & Technol Univ, Dept Microbiol, Patuakhali 8602, Bangladesh

5.Guangdong Acad Agr Sci, Inst Vet Med, Guangzhou 510640, Guangdong, Peoples R China

6.Sichuan Agr Univ, Coll Vet Med, Yaan 625014, Peoples R China

7.Yunnan Agr Univ, Coll Anim Sci & Technol, Kunming 6

关键词： Enterocytozoon bieneusi;Multilocus sequence typing;Genetic diversity;Population genetics;Nonhuman primates

期刊名称：VETERINARY PARASITOLOGY （ 影响因子：2.738； 五年影响因子：2.951 ）

ISSN：

年卷期：

页码：

收录情况： SCI

摘要： To infer population genetics of Enterocytozoon bieneusi in nonhuman primates (NHPs), 126 positive specimens in 839 fecal specimens from 23 NHP species in China based on ITS locus were used, belonging to genotypes Type IV, D, Peru8, Henan V, Peru11, PigEBITS7 and 3 novel ones (CM1, CM2 and CM3). Multilocus sequence typing employing four micro and minisatellites (MS1, MS3, MS4 and MS7) and ITS were used to analyze population structure of 85 isolates successfully amplified at all five loci, which yielded 59 multilocus genotypes. Linkage disequilibrium (LD) was measured using both multilocus sequences and allelic profile data. The observation of strong and significant LD with limited recombination in multilocus sequence analysis indicated the presence of overall clonal population structure of E. bieneusi, which was supported by allelic profile data analysis. Fu's selective neutrality test demonstrated the absence of neutral mutations and molecular selection. The population structure of common ITS genotypes (CM1, Type IV and D) was compared. Strong LD in multilocus sequence analysis versus insignificant LD and/or LE in allelic profile data analysis implied epidemic population in common ITS genotypes. No significant genetic isolation was evidenced by either phylogenetic or substructural analyses. The population genetics was also compared among the sub-population 1 (contained mainly genotype Type IV), sub-population 2 (contained mainly genotypes CM1 and D), sub-population 3 (contained mixed genotypes) and sub-population 4 (contained genotype Henan V). The presence of strong LD in multilocus data analysis with insignificant LD and/or LE in allele profile data analysis suggested the epidemic population in sub-populations. (C) 2013 Elsevier B.V. All rights reserved.

  • 相关文献

[1]Analysis of the Germplasm Resources and Genetic Relationships among Cymbidium tortisepalum Cultivars Using Amplified Fragment Length Polymorphism Markers. X.Y.Wu,D.M.Li,G.F.Zhu. 2013

[2]The dopamine D2 receptor gene polymorphisms associated with chicken broodiness. Xu, H. P.,Shen, X.,Zhou, M.,Luo, C. L.,Kang, L.,Liang, Y.,Zeng, H.,Nie, Q. H.,Zhang, D. X.,Zhang, X. Q.,Zhou, M.,Kang, L.. 2010

[3]RAPD analysis of 33 varieties of banana. Su, J,Zhou, P,Zheng, XQ,Huang, BZ,Li, FN. 2001

[4]DNA fingerprinting of kiwifruit (Actinidia spp.) genotypes using fluorescent amplified fragment length polymorphism. Xu, X. B.,Chen, H.,Yi, G. J.,Zhang, Q. M.. 2007

[5]Development and evaluation of multi-genotype varieties of rice derived from MAGIC lines. Li, Xiao-Fang,Liu, Zhi-Xia,Lu, Dong-Bo,Liu, Yan-Zhuo,Mao, Xing-Xue,Li, Xiao-Fang,Li, Zhi-Xin,Li, Xiao-Fang,Li, Hua-Jun. 2013

[6]Developing a core collection of litchi (Litchi chinensis Sonn.) based on EST-SSR genotype data and agronomic traits. Sun, Qingming,Bai, Lijun,Xiang, Xu,Zhao, Junsheng,Ou, Liangxi,Ke, Lixiang. 2012

[7]Analysis of the Germplasm Resources and Genetic Relationships among Cymbidium tortisepalum Cultivars Using Amplified Fragment Length Polymorphism Markers. Wu, X. Y.,Li, D. M.,Zhu, G. F.. 2013

[8]Genetic diversity within Oryza rufipogon germplasms preserved in Chinese field gene banks of wild rice as revealed by microsatellite markers. Zhang, Chi-Hong,Li, Dao-Yuan,Pan, Da-Jian,Jia, Ji-Zeng,Dong, Yu-Shen.

[9]High prevalence of torque teno sus virus in China and genetic diversity of the 5' non-coding region. Long, Jin-Xue,Gao, Fei,Yuan, Shi-Shan,Tong, Guang-Zhi,Wei, Zu-Zhang,Zhai, Shao-Lun,Wei, Wen-Kang,Chen, Qin-Ling,Lv, Dian-Hong,Wu, Da-Cheng,Zhai, Shao-Lun,Luo, Man-Lin.

[10]Core EST-SSR Marker Selection Based on Genetic Linkage Map Construction and Their Application in Genetic Diversity Analysis of Litchi (Litchi chinensis Sonn.) Germplasm Resources. Xiang, X.,Chen, D. M.,Ma, S. P.,Ma, W. C.,Fan, J.,Yang, X. Y.,Liu, M.,Sun, Q. M.. 2014

[11]SEQUENCE-RELATED AMPLIFIED POLYMORPHISM (SRAP) FOR STUDYING GENETIC DIVERSITY AND POPULATION STRUCTURE OF PLANTS AND OTHER LIVING ORGANISMS: A PROTOCOL. Li, X. Y.,Zhao, J.,Yang, F.,Fu, Q. W.,Liu, H. S.,Wang, D. D.,Yang, Y. C.,Li, J.,Wang, R. Y.. 2014

[12]The Advancement of Research on Banana Germplasm Resources in China. Wu, Y. L.,Yi, G. J.,Huang, B. Z.,Wei, Y. R.,Li, C. Y.,Hu, C. H.,Huang, Y. H.. 2013

[13]Genome composition and genetic diversity of Musa germplasm from China revealed by PCR-RFLP and SSR markers. Ning, Shu-Ping,Xu, Lin-Bing,Lu, Yan,Huang, Bing-Zhi,Ge, Xue-Jun. 2007

[14]Large-scale development of EST-SSR markers in sponge gourd via transcriptome sequencing. Wu, Hai-Bin,Gong, Hao,Liu, Peng,He, Xiao-Li,Luo, Shao-Bo,Zheng, Xiao-Ming,Zhang, Chang-Yuan,He, Xiao-Ming,Luo, Jianning.

[15]Biological characterization and genetic diversity analysis of two species of Pestalotiopsis causing twig dieback of Myrica rubra. Chen, Fangyong,Lu, Lianming,Wang, Yin,Ni, Haizhi,Wang, Dongmi,Du, Zhenguo.

[16]Development, characterization, and variability analysis of microsatellites from a commercial cultivar of Musa acuminata. Wu, Y. T.,Wang, J. Y.,Zheng, L. S.,Liu, W. L.,Huang, B. Z..

[17]Genetic diversity of Sporisorium scitamineum in mainland China assessed by SCoT analysis. Shen, Wan-kuan,Xu, Gang-hong,Luo, Ming-zhu,Jiang, Zi-de.

[18]Molecular characterization of Fusarium oxysporum f. sp cubense race 1 and 4 isolates from Taiwan and Southern China. Li, M. H.,Jiang, Z. D.,Yang, B.,Leng, Y.,Zhong, S.,Chao, C. P.,Liu, J. M.,He, Z. F..

[19]Retrotransposon-microsatellite amplified polymorphism, an electrophoretic approach for studying genetic variability among Schistosoma japonicum geographical isolates. Li, Juan,Zhao, Guang-Hui,Zhou, Dong-Hui,Zhu, Xing-Quan,Li, Juan,Li, Juan,Li, Xiao-Yan,Zhao, Guang-Hui,Sugiyama, Hiromu,Zou, Feng-Cai,Zhu, Xing-Quan,Li, Hai-Long,Ai, Lin.

[20]First molecular detection of porcine circovirus type 2 in bovids in China. Zhai, Shao-Lun,Chen, Rui-Ai,Luo, Man-Lin,He, Dong-Sheng,Zhai, Shao-Lun,Wen, Xiao-Hui,Lv, Dian-Hong,Wu, Da-Cheng,Yuan, Jie,Huang, Zhong,Zhou, Xiu-Rong,Wei, Wen-Kang,Chen, Rui-Ai,Chen, Sheng-Nan,Luo, Man-Lin,He, Dong-Sheng.

作者其他论文 更多>>
置顶
购物车
反馈

© 京ICP备09089781号-29 主办单位：广东省农业科学院

学术资源： 中国农业科学院 农业专业知识服务系统 农科联盟资源共建共享平台 中国农业科技文献与信息服务平台 中国农业期刊集成服务平台