您好，欢迎访问中国水产科学研究院 机构知识库！
中国水产科学研究院机构知识库

全部

  • 全部
  • 标题
  • 学者
  • 机构
  • 关键词

Complete mitochondrial genome of Cuora trifasciata (Chinese three-striped box turtle), and a comparative analysis with other box turtles

文献类型： 外文期刊

作者： Li, Wei 1 ; Zhang, Xin-Cheng 1 ; Zhao, Jian 1 ; Shi, Yan 1 ; Zhu, Xin-Ping 1 ;

作者机构： 1.Chinese Acad Fishery Sci, Key Lab Trop & Subtrop Fishery Resource Applicat, Minist Agr, Pearl River Fisheries Res Inst, Guangzhou 510380, Guangdong, Peoples R China

2.Shanghai Ocean Univ, Coll Life Sci & Fisheries, Shanghai 201306, Peoples R China

关键词： Mitochondrial genome;Cuora trifasciata;Genus Cuora;Comparative mitogenomic analysis;Phylogenetic analysis

期刊名称：GENE （ 影响因子：3.688； 五年影响因子：3.329 ）

ISSN：

年卷期：

页码：

收录情况： SCI

摘要： Cuora trifasciata has become one of the most critically endangered species in the world. The complete mitochondrial genome of C trifasciata (Chinese three-striped box turtle) was determined in this study. Its mitochondrial genome is a 16,575-bp-long circular molecule that consists of 37 genes that are typically found in other vertebrates. And the basic characteristics of the C trifasciata mitochondrial genome were also determined. Moreover, a comparison of C trifasciata with Cuora cyclornata, Cuora pani and Cuora aurocapitata indicated that the four mitogenomics differed in length, codons, overlaps, 13 protein-coding genes (PCGs), ND3, rRNA genes, control region, and other aspects. Phylogenetic analysis with Bayesian inference and maximum likelihood based on 12 protein-coding genes of the genus Cuora indicated the phylogenetic position of C trifasciata within Cuora. The phylogenetic analysis also showed that C trifasciata from Vietnam and China formed separate monophyletic clades with different Cuora species. The results of nucleotide base compositions, protein-coding genes and phylogenetic analysis showed that C trifasciata from these two countries may represent different Cuora species. (C) 2014 Elsevier B.V. All rights reserved.

  • 相关文献

[1]The complete mitochondrial genome of the critically endangered Vietnamese three-striped box turtle (Testudines: Geoemydidae). Li, Wei,Zhao, Jian,Shi, Yan,Xiao, Feng-Fang,Zhang, Xin-Cheng,Zhu, Xin-Ping,Li, Wei,Zhao, Jian,Zhu, Xin-Ping,Xiao, Feng-Fang. 2015

[2]The complete mitochondrial genome of Ancherythroculter kurematsui (Cypriniformes: Cyprinidae). Wang, G. J.,Yu, E. M.,Xie, J.,Wei, N.,Wu, J. R.,Li, J. S.,Zheng, Z. L.. 2016

[3]Characterization of the complete mitochondrial genome of the hybrid Epinephelus moara female xEpinephelus lanceolatus male, and phylogenetic analysis in subfamily epinephelinae. Gao, Fengtao,Zhu, Ying,Yang, Guanpin,Gao, Fengtao,Wei, Min,Zhu, Ying,Guo, Hua,Chen, Songlin,Wei, Min. 2017

[4]Complete mitochondrial genome of summer flounder Paralichthys dentatus (Pleuronectiformes, Paralichthyidae). Xu, Yongjiang,Liu, Xuezhou,Shi, Bao,Wang, Bin,Xu, Yongjiang,Liu, Xuezhou,Shi, Bao,Wang, Bin. 2016

[5]The complete mitochondrial genome of Shizothorax grahami (Cypriniformes: Cyprinidae). Zheng, Zonglin,Yu, Ermeng,Li, Zhifei,Ou, Hongxia,Wang, Guangjun. 2016

[6]The complete mitochondrial genome of Cleithenes herzenstein and its phylogenetic analysis. Zhang Bo,Song Wenping,Liu Kefeng,Zheng Debin,Ma Chao,Xiao Guangxia.

[7]Characterization of the complete mitochondrial genome of Gymnocypris namensis (Cypriniformes:Cyprinidae). Qiao, Huiying,Cheng, Qiqun,Chen, Ying,Qiao, Huiying,Chen, Ying.

[8]The complete mitochondrial genome of the sleepy cod (Oxyeleotris lineolatus). Chen, Haigang,Zhu, Xinping,Chen, Haigang,Li, Wei,Zhao, Jian,Zhu, Xinping.

[9]The complete mitochondrial genome of jade perch, Scortum barcoo (Perciformes: Terapontidae: Scortum). Liu, Chun,Li, Kaibin,Wang, Qing,Wang, Fang,Zeng, Weiwei,Mai, Xiaomei,Wu, Shuqin.

[10]Mitochondrial genome sequence of the Japanese white croaker Pennahia argentata (Perciformes: Sciaenidae). Li, Ang,Li, Yuan,Gao, Tianxiang,Li, Ang,Sun, Dianrong.

[11]The complete mitochondrial genome sequence of Pampus chinensis (Perciformes: Stromateidae). Sun, Dandan,Cheng, Qiqun,Qiao, Huiying,Zhang, Heng,Chen, Ying,Sun, Dandan,Qiao, Huiying,Chen, Ying.

[12]The complete mitochondrial genome of the juvenile Atlantic bluefin tuna Thunnus thynnus (Perciformes, Scombridae). Li, Yanlu,Chen, Chao,Yu, Hong,Peng, Shiming,Sun, Shuguang,Wang, Lu,Kong, Xiangdi,Li, Yanlu,Chen, Chao,Kong, Xiangdi,Chen, Chao,Meng, Xiangjun,Huang, Ying.

[13]Complete mitochondrial genome of the bigeye scad Selar crumenophthalmus (Perciformes: Carangidae). Li, Min,Chen, Zuozhi,Zou, Keshu,Li, Min,Zou, Keshu.

[14]Complete mitochondrial genome of catfish Bagarius bagarius (Hamilton, Sisoridae; Siluriformes) from Indus River Sindh, Pakistan. Lashari, Punhal,Deng, Yulin,Lashari, Punhal,Laghari, Muhammad Younis,Xu, Peng,Zhao, Zixia,Jiang, Li,Sun, Xiaowen,Zhang, Yan,Lashari, Punhal,Laghari, Muhammad Younis,Narejo, Naeem Tariq.

[15]The complete mitochondrial genome sequence of Schizothorax wangchiachii (Cypriniformes: Cyprinidae). Chen, Ying,Cheng, Qiqun,Qiao, Huiying,Zhu, Yuxia,Chen, Wenming,Ren, Guijing,Chen, Ying,Qiao, Huiying,Zhu, Yuxia,Chen, Wenming.

[16]The complete mitochondrial genome sequence of Rastrelliger kanagurta (Perciformes: Scombridae). Chen, Ying,Cheng, Qiqun,Qiao, Huiying,Zhu, Yuxia,Chen, Wenming,Chen, Ying,Qiao, Huiying,Zhu, Yuxia,Chen, Wenming.

[17]The complete mitochondrial genome sequence of Schizothorax macropogon (Cypriniformes: Cyprinidae). Zhu, Yuxia,Chen, Ying,Cheng, Qiqun,Qiao, Huiying,Chen, Wenming,Zhu, Yuxia,Chen, Ying,Qiao, Huiying,Chen, Wenming.

[18]Complete mitochondrial genome of Ark shell Scapharca subcrenata. Hou, Ya,Ren, Jian-Feng,Dong, Chun-Guang,Hou, Ya,Wu, Biao,Liu, Zhi-Hong,Yang, Ai-Guo,Zhou, Li-Qing,Dong, Chun-Guang,Tian, Ji-Teng.

[19]Complete mitochondrial genome of Caridina nilotica gracilipes. Xu, Gangchun,Du, Fukuan,Nie, Zhijuan,Xu, Pao,Gu, Ruobo.

[20]The Complete mitochondrial genome of Spinibarbus denticulatus (Oshima). Tong, Guang-Xiang,Kuang, You-Yi,Geng, Long-Wu,Yin, Jia-Sheng,Xu, Wei.

作者其他论文 更多>>
置顶
购物车
反馈

© 京ICP备09089781号-29 主办单位：中国水产科学研究院

学术资源： 中国农业科学院 农业专业知识服务系统 农科联盟资源共建共享平台 中国农业科技文献与信息服务平台 中国农业期刊集成服务平台