中国水产科学研究院机构知识库

Mitochondrial genome of the bullet tuna Auxis rochei from Indo-West Pacific collection provides novel genetic information about two subspecies

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文献类型：外文期刊

作者： Li, Mingming ¹ ; Guo, Liang ¹ ; Zhang, Heng ² ; Yang, Sen ¹ ; Chen, Xinghan ¹ ; Lin, Haoran ¹ ; Meng, Zining ¹ ;

作者机构： 1.Sun Yat Sen Univ, State Key Lab Biocontrol, Inst Aquat Econ Anim, Guangdong Prov Key Lab Aquat Econ Anim,Sch Life S, Guangzhou 510275, Guangdong, Peoples R China

2.Chinese Acad Fishery Sci, East China Sea Fishe

关键词： Auxis rochei;mitochondrial genome;subspecies

期刊名称：MITOCHONDRIAL DNA PART A （影响因子：1.514；五年影响因子：0.707 ）

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收录情况： SCI

摘要： Previously morphological studies supported the division of the bullet tuna into the two subspecies, Auxis rochei rochei and A. rochei eudorax. As a cosmopolitan species, A. rochei rochei ranges in the Indo-West Pacific and Atlantic oceans, while A. rochei eudorax inhabits in eastern Pacific region. Here, we used the HiSeq next-generation sequencing technique to determine the mitochondrial genome (mitogenome) of A. rochei from Indo-West Pacific collection, and then compared our data with mitogenomic sequences of the Atlantic and eastern Pacific retrieved from NCBI database. Results showed the mitogenome of A. rochei from three geographic collections shared the same genes and gene order, similar to typical teleosts. Also, we examined a low level of nucleotide diversity among these mitogenomic sequences. Interestingly, nucleotide diversity of intra-subspecies (Atlantic versus Indo-West) was higher than that of inter-subspecies (Atlantic versus eastern Pacific, Indo-West versus eastern Pacific).

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