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The High-throughput sequencing of Sillago japonica mitochondrial genome reveals the phylogenetic position within the genus Sillago

文献类型： 外文期刊

作者： Niu, Sufang 1 ; Wu, Renxie 1 ; Liu, Yong 2 ; Wang, Xuefeng 1 ;

作者机构： 1.Guangdong Ocean Univ, Coll Fisheries, Zhanjiang, Guangdong, Peoples R China

2.Chinese Acad Fishery Sci, South China Sea Fisheries Res Inst, Guangzhou, Guangdong, Peoples R China

关键词： High-throughput sequencing technology;mitogenome;Sillago japonica

期刊名称：MITOCHONDRIAL DNA PART A （ 影响因子：1.514； 五年影响因子：0.707 ）

ISSN：

年卷期：

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收录情况： SCI

摘要： The complete mitogenome of Sillago japonica was determined through high-throughput DNA sequencing technology. The circular mtDNA molecule was 16645 bp in size and encoded 13 protein-coding genes, 2 rRNAs, 22 tRNAs and 2 non-coding regions, with the genearrangement and content identical to other typical vertebrate mitogenomes. The identity analysis revealed that the mitogenome sequence of 5. japonica shared a relatively high sequence identity to S. asiatica (81.5%) compared with 5. aeolus (77.5%), S. indica (77.1%), and 5. sihama (76.3%). The neighbor-joining tree of complete mitogenome sequence showed that S. japonica firstly clustered together with S. asiatica, then grouped with S. indica and 5. sihama, and finally gathered with S. aeolus. Taken together, the results absolutely supported the evolutionary position of S. japonica and provided new insights into phylogenetic relationships of Sillago.

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