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Identification and characterization of lymph organ microRNAs in red swamp crayfish, Procambarus clarkii infected with white spot syndrome virus

文献类型： 外文期刊

作者： Du, Zhi-Qiang 1 ; Leng, Xiao-Yun 1 ; Shen, Xiu-Li 2 ; Jin, Yan-Hui 1 ; Li, Xin-Cang 3 ;

作者机构： 1.Inner Mongolia Univ Sci & Technol, Sch Life Sci & Technol, Baotou, Inner Mongolia, Peoples R China

2.Inner Mongolia Univ Sci & Technol, Baotou, Inner Mongolia, Peoples R China

3.Chinese Acad Fishery Sci, East China Sea Fisheries Res Inst, Shanghai 200090, Peoples R China

关键词： Procambarus clarkii;Lymph organ;WSSV;Illumina sequencing;microRNAs

期刊名称：FISH & SHELLFISH IMMUNOLOGY （ 影响因子：4.581； 五年影响因子：4.851 ）

ISSN： 1050-4648

年卷期： 2017 年 69 卷

页码：

收录情况： SCI

摘要： MicroRNAs (miRNAs) were important post-transcriptional regulators and played vital roles in innate immunity system of invertebrates, especially in the aspect of antivirus. In this study, using high throughput small RNAs Illumina sequencing system, differentially expressed miRNAs (DEMs) from lymph organs in red swamp crayfish, Procambarus clarkii, infected with white spot syndrome virus, were identified. As a result, 32 known miRNAs and 7 novel miRNAs were identified in crayfish lymph organ small RNAs library of NG and WG. Among them, 7 differentially expressed miRNAs (DEMs) were predicted to be involved in the lymph organ antiviral innate immunity of P. clarkii. Besides, the results showed that putative target genes of these DEMs were related with tight junction, RNA transport, regulation of actin cytoskeleton, focal adhesion, vascular smooth muscle contraction, mRNA surveillance pathway, NOD-like receptor signaling pathway, leukocyte transendothelial migration, and protein processing in endoplasmic reticulum. These results might provide the guiding theoretical foundation for future studies about crustaceans' antiviral innate immunity. (C) 2017 Elsevier Ltd. All rights reserved.

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