中国水产科学研究院机构知识库

Mitochondrial genome of the Torpedo scad Megalaspis cordyla (Perciformes: Carangidae): genome characterization and phylogenetic consideration

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文献类型：外文期刊

作者： Li, Min ¹ ; Li, Yufang ¹ ; Chen, Zuozhi ¹ ;

作者机构： 1.Chinese Acad Fishery Sci, South China Sea Fisheries Res Inst, Guangzhou, Guangdong, Peoples R China

2.Minist Agr, Sci Observing & Expt Stn South China Sea Fishery, Guangzhou, Guangdong, Peoples R China

关键词： Carangidae;Megalaspis cordyla;mitochondrial genome

期刊名称：MITOCHONDRIAL DNA PART A （影响因子：1.514；五年影响因子：0.707 ）

ISSN： 2470-1394

年卷期： 2016 年 27 卷 3 期

页码：

收录情况： SCI

摘要： This study presented the complete mitochondrial genome of the Torpedo scad Megalaspis cordyla, the only member of its genus, as well as its phylogenetic position in Carangidae. The genome is 16,566 bp containing the usual 2 rRNA genes, 13 protein-coding genes, 22 tRNA genes, and 1 control region. Gene organization is similar to that observed in most other vertebrates. Gene overlapping and separating were also observed in M. cordyla mitogenome. The overall base compositions of mitogenome was 28.83% A, 25.81% T, 15.93% G, and 29.43% C. Phylogenetic analyses using the concatenated sequence of the protein-coding genes of the reported Carangidae mitogenome showed similar results in the neighbour-joining and Bayesian inference trees. Three clades were formed as Subfamilies Caranginae, Seriolinae and Trachinotinae in Carangidae. M. cordyla was most closely related to the species in genus Caranx.

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