中国水产科学研究院机构知识库

Complete mitochondrial genome of the kawakawa tuna Euthynnus affinis

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文献类型：外文期刊

作者： Li, Mingming ¹ ; Guo, Liang ¹ ; Zhang, Heng ² ; Yang, Sen ¹ ; Chen, Xinghan ¹ ; Meng, Zining ¹ ; Lin, Haoran ¹ ;

作者机构： 1.Sun Yat Sen Univ, Sch Life Sci, Guangdong Prov Key Lab Aquat Econ Anim, State Key Lab Biocontrol,Inst Aquat Econ Anim, Guangzhou 510275, Guangdong, Peoples R China

2.Chinese Acad Fishery Sci, East Chi

关键词： Euthynnus affinis;kawakawa;mitochondrial genome;next-generation sequencing

期刊名称：MITOCHONDRIAL DNA PART A （影响因子：1.514；五年影响因子：0.707 ）

ISSN： 2470-1394

年卷期： 2016 年 27 卷 3 期

页码：

收录情况： SCI

摘要： The present study represents the first report on the complete mitochondrial genome (mitogenome) of the kawakawa tuna Euthynnus affinis. Illumina next-generation sequencing generated a total of 38,428 reads with an average sequencing depth of 232.83x. The mitogenome of E. affinis was 16,513 bp in length and contains 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes and a 849 bp control region, as found in other typical teleosts. With the exception of ND6 and eight tRNA genes, all other mitochondrial genes were encoded on the heavy strand, whose nucleotide composition is 28.11% A, 24.77% T, 17.16% G and 29.96% C. All the protein-coding genes shared the start codon ATG except for COXI gene (start with GTG), and appeared to be terminated with four types of stop codons including two complete codons (TAA and TAG) and two incomplete codons (T and TA).

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