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Identifying the effects of cropping with different pear cultivars on microbial community composition and networks in orchard soils

文献类型： 外文期刊

作者： Wang, Li 1 ; Ye, Xiaomei 1 ; Shen, Zongzhuan 2 ; Zhang, Yingpeng 1 ; Lin, Jing 3 ;

作者机构： 1.Jiangsu Acad Agr Sci, Inst Anim Sci, Key Lab Crop & Livestock Integrated Farming, Minist Agr & Rural Affairs, Nanjing 210014, Peoples R China

2.Nanjing Agr Univ, Jiangsu Collaborat Innovat Ctr Solid Organ Wastes, Jiangsu Prov Key Lab Solid Organ Waste Utilizat,K, Educ Minist Engn Ctr Resource Saving Fertilizers, Nanjing 210095, Peoples R China

3.Jiangsu Acad Agr Sci, Inst Pomol, Nanjing 210014, Peoples R China

关键词： Pear cultivar; Soil chemical property; Microbial composition; Co-occurrence network; Keystone taxa

期刊名称：ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH （ 影响因子：5.8； 五年影响因子：5.4 ）

ISSN： 0944-1344

年卷期： 2023 年

页码：

收录情况： SCI

摘要： The role of plant genotype in determining the assembly of soil microorganisms is widely accepted; however, the effects of cropping with different cultivars of perennial crop plants on the composition of soil microbial communities are not fully understood. In the current study, high-throughput amplicon sequencing and real-time PCR were used to investigate the major features of bacterial community composition, ecological networks, and soil physicochemical properties in three replicate pear orchards, each planted with monocultures of pear cultivars Hosui (HS) or Sucui (SC) of similar ages. A distinct difference in the composition of microbial communities was observed between soils of HS and SC orchards. A significantly greater relative abundance of Verrucomicrobia and Alphaproteobacteria whereas a significantly lower relative abundance of Betaproteobacteria were found in soils of HS cropped orchards than that in SC orchards. Sphingomonas sp., belonging to the Alphaproteobacteria, was recognized as a key species in the co-occurrence network of the microbial interactions. Moreover, redundancy analysis, the Mantel correlation test, and random forest analysis showed that soil pH was the dominant driver in determining microbial community composition in HS soils, whereas soil organic matter was the primary factor determining microbial community composition in SC soils. Altogether, we provide evidence that soils in HS orchards harbor unique microbial communities enriched with respect to microbial groups associated with nutrient cycling, whereas soils in SC orchards are dominated by a group of beneficial microbes exhibiting plant growth promotion. These findings have implications for science-based guidance for manipulation of the soil microbiome to achieve sustainable food production.

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