Chromosome-level genome assembly of marmalade hoverfly Episyrphus balteatus (Diptera: Syrphidae)
文献类型: 外文期刊
作者: Ji, Jichao 1 ; Gao, Yue 1 ; Xu, Chao 1 ; Zhang, Kaixin 1 ; Li, Dongyang 1 ; Li, Bingbing 5 ; Chen, Lulu 6 ; Gao, Mengxue 5 ; Huangfu, Ningbo 1 ; Elumalai, Punniyakotti 1 ; Gao, Xueke 1 ; Zhu, Xiangzhen 1 ; Wang, Li 1 ; Luo, Junyu 1 ; Cui, Jinjie 1 ;
作者机构: 1.Chinese Acad Agr Sci, Inst Cotton Res, State Key Lab Cotton Biobreeding & Integrated Util, Anyang 455000, Peoples R China
2.Zhengzhou Univ, Sch Agr Sci, State Key Lab Cotton Biobreeding & Integrated Util, Zhengzhou Res Base, Zhengzhou 450001, Peoples R China
3.Chinese Acad Agr Sci, Western Agr Res Ctr, Changji 831100, Peoples R China
4.Tianjin Acad Agr Sci, Tianjin 300384, Peoples R China
5.Henan Univ, Coll Life Sci, Key Lab Plant Stress Biol, Kaifeng 450046, Henan, Peoples R China
6.Xinjiang Agr Univ, Coll Agron, Urumqi 830052, Peoples R China
期刊名称:SCIENTIFIC DATA ( 影响因子:5.8; 五年影响因子:8.9 )
ISSN:
年卷期: 2024 年 11 卷 1 期
页码:
收录情况: SCI
摘要: Episyrphus balteatus can provide dual ecosystem services including pest control and pollination, which the larvae are excellent predators of aphid pest whereas adults are efficient pollinator. In this study, we assembled a high-quality genome of E. balteatus from northern China geographical population at the chromosome level by using Illumina, PacBio long reads, and Hi-C technologies. The 467.42 Mb genome was obtained from 723 contigs, with a contig N50 of 9.16 Mb and Scaffold N50 of 118.85 Mb, and 90.25% (431.75 Mb) of the assembly was anchored to 4 pseudo-autosomes and one pseudo-heterosome. In total, 14,848 protein-coding genes were annotated, and 95.14% of genes were fully represented in NR, GO, KEGG databases. Besides, we also obtained the mitochondrial genome of E. balteatus of 16, 837 bp in length with 37 typical mitochondrial genes. Overall, this high-quality genome is valuable for evolutionary and genetic studies of E. balteatus and other Syrphidae hoverfly species.
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